Protein Alignment CG34367 and pax-3

DIOPT Version :10

• Sequence 1: NP_001097140.1
• Gene: CG34367 / 5740879
• FlyBaseID: FBgn0085396
• Length: 420
• Species: Drosophila melanogaster
• Sequence 2: NP_496189.2
• Gene: pax-3 / 185022
• WormBaseID: WBGene00003939
• Length: 308
• Species: Caenorhabditis elegans
• Alignment Length: 301
• Identity: 75/301 - (24%)
• Similarity: 122/301 - (40%)
• Gaps: 71/301 - (23%)

  Fly    35 KPTEVKNSI---------FINSISSGGSYADTCASGEESVDIDITDLSVSESNTILAIDPEPTEE 90
            ||..:...:         .:|..:..||.:.....|.....:.:   ...|...::|.|..|...
 Worm    47 KPCHISRQLKVSHGAVSKILNRYAETGSISPGQIGGSPRARLTV---QAVEKEILIACDENPQMS 108

  Fly    91 SHSQRE----EHVETYSLSPTLHKAAVEPKPKNWLISEDLDVDSQPEDPKMS----GLPTASITE 147
            :...|:    :.:.|...:||:      |..|..:.::.:.|..:.|..::|    .:...||.|
 Worm   109 AAELRDWLIHKDICTKGNAPTV------PAIKRLIGNKGVGVPKKMERKRLSYSIDSILGISIDE 167

  Fly   148 CTEDSNTPKLAPDKPLLPEECVSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFE 212
            |::.|:.          .||..||..               :...||:||:||.:||:.||..|.
 Worm   168 CSKSSSD----------DEEGSSPSN---------------DASSRRNRTSFTAEQLDVLENAFR 207

  Fly   213 ETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRK----HENQMHKGFLVGSRSPPIATPLEP 273
            ...||.|..||.:|:..||||.::..||.||||:|||    ::....:||  || |||....|.|
 Worm   208 ADTYPHANARESISKETGLSEEKIMTWFSNRRARCRKNMPMYQQYNVQGF--GS-SPPSYPTLLP 269

  Fly   274 CRVAPYVSLAALRSSS----------VPSHPAAATSSNPQA 304
               :|.:.|.:..:|.          :.|.|.::.||.|.:
 Worm   270 ---SPMMFLPSYSTSPQLNPLFFQHILQSSPPSSQSSPPSS 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34367	NP_001097140.1	Homeodomain	193..249	CDD:459649	28/55 (51%)
		OAR	392..410	CDD:461067
pax-3	NP_496189.2	PAX	13..141	CDD:238076	16/102 (16%)
		Homeodomain	188..244	CDD:459649	28/55 (51%)