DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34367 and ceh-53

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_500361.3 Gene:ceh-53 / 182467 WormBaseID:WBGene00015651 Length:203 Species:Caenorhabditis elegans


Alignment Length:202 Identity:57/202 - (28%)
Similarity:85/202 - (42%) Gaps:64/202 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 LLPEECVS--PEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREEL 225
            ::.:||.|  |:.::|.|          ..:.||.||.|:.:||..||..|.:..|||...||.|
 Worm    10 MVMKECSSSPPQSAQNSE----------ERRVRRLRTAFSENQLELLEEAFLKCQYPDVQQRETL 64

  Fly   226 SQRLGLSEARVQVWFQNRRAKCRKH------------ENQMHKGFLVG----------------- 261
            .::..|:|||:||||:|||||.||.            |....:|...|                 
 Worm    65 GKQTELAEARIQVWFKNRRAKARKRQRNESTDSCSTTEESNEEGDADGCLKKKAKNETTIITWTP 129

  Fly   262 -------SRSPPI----ATPLEP----CRVAPYVSLAALRS-SSVPSHPAAATSSNPQAPGVSGT 310
                   |.||..    .||..|    |...|:.:....|: :::|:|..|||::       :.:
 Worm   130 GAALFNSSLSPTTTSIPTTPAPPLNFICHQNPFYAYNPYRNLNTIPTHLLAATTT-------AAS 187

  Fly   311 SSSGKVV 317
            ..|.|:|
 Worm   188 IGSAKLV 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 29/55 (53%)
OAR 392..410 CDD:461067
ceh-53NP_500361.3 Homeodomain 32..81 CDD:459649 24/48 (50%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.