DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and alr-1

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_509860.1 Gene:alr-1 / 181302 WormBaseID:WBGene00044330 Length:362 Species:Caenorhabditis elegans


Alignment Length:373 Identity:107/373 - (28%)
Similarity:140/373 - (37%) Gaps:130/373 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 PEPTEESHSQREEHVETYSLSPTLH-----------KAAVEPKPKNWLISEDLDVDSQPEDPKMS 138
            ||..:|..|:.|:.::..  .|.||           |:.:|........:..|...|.|      
 Worm     2 PELKKEDSSKDEKDLDMN--CPPLHRPNGADLNQYSKSLMEQLQAQLFANPALQFPSFP------ 58

  Fly   139 GLPTASITECTEDSNTPKLAPDKPLLPEECVSPEPS--RNREHCDPLDTSLVNT-------KQRR 194
              |..||...|.:.:..|....|.....:.:....|  .|||:..|.|.:  |:       ||||
 Worm    59 --PAFSIAALTNNQHELKEDDGKKTPTGDNILEAASVLDNRENGSPSDGT--NSPDDNGKRKQRR 119

  Fly   195 SRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHE-------- 251
            .||.|:..||:|||::|..|||||.|.||||:.|:.|:||||||||||||||.||.|        
 Worm   120 YRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYRKQERSSTHHPY 184

  Fly   252 ----------------------------NQMHKGFLVG-----------SRSP--PIAT--PLEP 273
                                        ||.....|:.           |:||  |:.|  |:.|
 Worm   185 QAPMSIPNSNGDNPYQMMLSQEAIFAAINQQAAAHLLNEQVRIATSDRRSQSPSVPVTTSSPILP 249

  Fly   274 CRVAP-----------------------YV-----SLAALRSSSVPSHPAAATS----------- 299
            ..|.|                       ||     ::.|.|:..:.|.||.||:           
 Worm   250 TSVTPTFQNADALNMLFGGITPVTQQLLYVQQFSRAMDAFRTQLLGSVPAGATAEVTDVVALKTE 314

  Fly   300 ---SNPQAPGVS--GTSSSGKVVTVDSPHNH---NPAISRSAIKQFSS 339
               ||.:|...|  .|.|||...|..||.|.   |..||....|:.||
 Worm   315 DSKSNSRAGSSSPTPTESSGAAATSTSPTNFADMNSLISDVKPKEESS 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 37/55 (67%)
OAR 392..410 CDD:461067
alr-1NP_509860.1 Homeodomain 118..174 CDD:459649 37/55 (67%)
Blue background indicates that the domain is not in the aligned region.

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