DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and Gsc

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_034481.1 Gene:Gsc / 14836 MGIID:95841 Length:256 Species:Mus musculus


Alignment Length:145 Identity:48/145 - (33%)
Similarity:69/145 - (47%) Gaps:32/145 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 LDVDSQPEDPKMSG-LPTASITECTEDSNTPKLAPDKPLLPEECVSPEPSR-------------- 175
            |.|.:.|..|...| :|.....:|:.....|.......:|    |||.|.:              
Mouse    88 LHVQAAPVGPACCGAVPPLGAQQCSCVPTPPGYEGPGSVL----VSPVPHQMLPYMNVGTLSRTE 148

  Fly   176 ----NREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARV 236
                |:.||         .::||.||.||.:||..||.||:||.|||...||:|::::.|.|.:|
Mouse   149 LQLLNQLHC---------RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKV 204

  Fly   237 QVWFQNRRAKCRKHE 251
            :|||:|||||.|:.:
Mouse   205 EVWFKNRRAKWRRQK 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 31/55 (56%)
OAR 392..410 CDD:461067
GscNP_034481.1 Homeodomain 161..217 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..256 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.

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