DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and Vsx1

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_473409.1 Gene:Vsx1 / 114889 MGIID:1890816 Length:363 Species:Mus musculus


Alignment Length:117 Identity:48/117 - (41%)
Similarity:60/117 - (51%) Gaps:19/117 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 PKLAPDKPLLPEECVSPEP-----------------SRNREHCDP-LDTSLVNTKQRRSRTNFTL 201
            |...|: |.:.:..|.|.|                 |.:.|..|| :...|...|:||.||.||.
Mouse   117 PSAGPE-PAVAQGPVHPPPALGSQQRSESVSTSDGDSPSEEKNDPKMSLILGKRKKRRHRTVFTA 180

  Fly   202 DQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQ 253
            .||.|||:.|.|.||||.:.||.|:.:..|.|.|:||||||||||.||.|.:
Mouse   181 HQLEELEKAFGEAHYPDVYAREMLAAKTELPEDRIQVWFQNRRAKWRKREKR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 33/55 (60%)
OAR 392..410 CDD:461067
Vsx1NP_473409.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
Octapeptide motif 31..38
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..66
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..166 8/44 (18%)
Nuclear localization signal. /evidence=ECO:0000255 168..173 1/4 (25%)
Homeodomain 172..228 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..363
Blue background indicates that the domain is not in the aligned region.

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