DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and gsc2

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_017946465.2 Gene:gsc2 / 101734976 XenbaseID:XB-GENE-22064768 Length:181 Species:Xenopus tropicalis


Alignment Length:85 Identity:39/85 - (45%)
Similarity:51/85 - (60%) Gaps:10/85 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 VSPEPSRNREHCDPLDTSLVNTKQ--RRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGL 231
            |:.||        |...||.:|::  ||.||.||.|||..||:.|....|||...||:|:.|:.|
 Frog    86 VTVEP--------PTLLSLPHTQRRTRRHRTIFTEDQLQALEQTFHHNQYPDVIAREQLAGRIQL 142

  Fly   232 SEARVQVWFQNRRAKCRKHE 251
            .|.||:|||:|||||.|:.:
 Frog   143 KEERVEVWFKNRRAKWRRQK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 31/55 (56%)
OAR 392..410 CDD:461067
gsc2XP_017946465.2 Homeodomain 109..160 CDD:459649 27/50 (54%)
Blue background indicates that the domain is not in the aligned region.

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