DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34367 and pitx3

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_002935807.2 Gene:pitx3 / 100496690 XenbaseID:XB-GENE-486162 Length:292 Species:Xenopus tropicalis


Alignment Length:326 Identity:90/326 - (27%)
Similarity:132/326 - (40%) Gaps:103/326 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 DLDVDSQPEDPKMSGLPTASITECTEDSNTPKLAPDKPLLPEECVSPEPSRNREHCD--PLDTSL 187
            :|..||:...|.:|          ..||.||:  .|.....:|....|.|:..:..|  |.|.:|
 Frog     4 NLLTDSEARSPALS----------LSDSGTPQ--HDHSCKGQEHSDTEKSQQNQTDDSNPEDGTL 56

  Fly   188 VNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHE- 251
             ..||||.||:||..||.|||..|:...|||...|||::....|:||||:|||:|||||.||.| 
 Frog    57 -KKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRER 120

  Fly   252 NQ----------------------MHKGF------LVGSRSPPIATPLEP----CRVAPYVSLAA 284
            ||                      |:.|:      ..|..:.|::....|    ..|:|   |::
 Frog   121 NQQAELCKNSFGAQFNGLMQPYDDMYSGYSYNNWATKGLATSPLSAKSFPFFNSMNVSP---LSS 182

  Fly   285 LRSSSVPSHPAAATSSNPQAP----GVSGTS--SSGKVVTVDSPHNHNPAISRSAIKQFSSTVAA 343
            ....|.|:..|:.|..:...|    ||.|:|  :.|.:..::|| :.|.|:|.||.         
 Frog   183 QPMFSPPNSIASMTMPSSMVPSAVTGVPGSSLNNLGNINNLNSP-SLNSAVSASAC--------- 237

  Fly   344 AAAFSAFDPAIISVAAHQYAAAITNGTVPAGLFSVPQYSINLAAFAAAHSKSSSIADLRMKAKKH 408
                                                .|:...:.:....:.:||:|.||:|||:|
 Frog   238 ------------------------------------PYASTASPYMYRDTCNSSLASLRLKAKQH 266

  Fly   409 S 409
            :
 Frog   267 A 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 31/55 (56%)
OAR 392..410 CDD:461067 9/18 (50%)
pitx3XP_002935807.2 Homeodomain 61..117 CDD:459649 31/55 (56%)
OAR 250..267 CDD:461067 8/16 (50%)

Return to query results.
Submit another query.