DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and vsx2

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_004917101.1 Gene:vsx2 / 100493176 XenbaseID:XB-GENE-853775 Length:377 Species:Xenopus tropicalis


Alignment Length:377 Identity:97/377 - (25%)
Similarity:139/377 - (36%) Gaps:92/377 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 TDLSVSESNTILAIDPEPTEESHSQREEHVETYSLSPTLHKAAVE---------------PKPKN 119
            |...:.|   ||.::.||  .:.|||..|    .|||..|..|..               .:|..
 Frog    14 TGFGIQE---ILGLNKEP--PTPSQRHLH----PLSPGTHLLAARSGLGLLAAGGIPTFYTQPGL 69

  Fly   120 WLISEDLDVDSQPEDPKM--SGLPTASITECTEDSNTPKLAPDKPLLPEECVSPEPSRNREHCDP 182
            .|        ..|..|::  :|....|.| |:.||.....:..|  ||:.....:..:.|.|..|
 Frog    70 LL--------GDPPGPRIQQTGQEEGSRT-CSSDSEDVSSSDRK--LPKSLSQSKKRKKRRHRYP 123

  Fly   183 LDTSLVNTKQ-------------RRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEA 234
            ......|..:             |..||.||..||.|||:.|.|.||||.:.||.|:.:..|.|.
 Frog   124 NIMFEGNRPKIKFGVFTGNKGAIRSFRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPED 188

  Fly   235 RVQVWFQNRRAKCRKHENQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALRSSSVPSHPAAATS 299
            |:||||||||||.||.|....:..:                :|.|....|:...|:|...:...|
 Frog   189 RIQVWFQNRRAKWRKREKCWGRSSV----------------MAEYGLYGAMVRHSIPLPESILKS 237

  Fly   300 SNPQAPGVSGTSSSGKVVT--VDSPHNHNPAISRSAIKQF-----SSTVAAAAAFSAFDPAIISV 357
            :.   .|:..:.:...:|.  :..|..    .|:...:||     ..|:.|||.         .|
 Frog   238 AK---DGIMESCAPWLLVQDGLQMPRR----FSKPEYQQFFAGMHKKTLEAAAD---------RV 286

  Fly   358 AAHQYAAAITNGTVPAGLFSVPQYSINLAAFAAAHSKSSSIADLRMKAKKHS 409
            ...:..|........|.....|:.|   |..:....:.:|||.||.:|::||
 Frog   287 QQPEREAPALPSQPTANERREPELS---APISEEELRENSIAALRARAQEHS 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 32/55 (58%)
OAR 392..410 CDD:461067 8/18 (44%)
vsx2XP_004917101.1 Homeodomain 147..203 CDD:459649 32/55 (58%)
OAR 318..336 CDD:461067 8/18 (44%)

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