DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and pdx1

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_002934065.1 Gene:pdx1 / 100490648 XenbaseID:XB-GENE-483331 Length:271 Species:Xenopus tropicalis


Alignment Length:128 Identity:43/128 - (33%)
Similarity:62/128 - (48%) Gaps:19/128 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 KQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQMH 255
            :.:|:||.:|..||.|||:.|....|.....|.||:..|.|:|..:::||||||.|.:|.|::..
 Frog   146 ENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEEDKKR 210

  Fly   256 KGFLVGSRSPPIATPL---------EP-CRVAPYVSLAALRSSSVP----SHPAAATSSNPQA 304
                 |..|.|....:         || |......:...:|||::|    |:|..||.|..||
 Frog   211 -----GRGSDPEQDSVVSSADVIKDEPQCLGNSQNTGDLVRSSALPTSPQSNPIPATGSLRQA 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 24/55 (44%)
OAR 392..410 CDD:461067
pdx1XP_002934065.1 Homeodomain 148..204 CDD:459649 24/55 (44%)
Blue background indicates that the domain is not in the aligned region.

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