DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and sia2

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_002942206.3 Gene:sia2 / 100489935 XenbaseID:XB-GENE-482070 Length:220 Species:Xenopus tropicalis


Alignment Length:280 Identity:66/280 - (23%)
Similarity:96/280 - (34%) Gaps:88/280 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 TCASGEESVDIDITDLSVSESNTILAIDPEPTEESHSQREEHVETYSLSPTLHKAAVEPKP--KN 119
            ||.|  |...|..|.|::.:........|:..::|.|      ..:.|.|       :|.|  :|
 Frog     2 TCDS--ELEQIIYTALTLQDDYPAFCPPPKDQDKSSS------SLFGLIP-------DPLPGVEN 51

  Fly   120 --------WLISEDLDVDSQPED-------------PKMSGLPTASITECTEDSNTPKLAPDKPL 163
                    |.:...|.:   |:|             |....|.|         :|.......:||
 Frog    52 QGILQKTIWELYSVLGI---PQDSFLNRSLKHHDLEPNKESLST---------NNEISKGRKRPL 104

  Fly   164 LPEECVSPEPSRNREHCDP---LDTSLVNTKQR-RSRTNFTLDQLNELERLFEETHYPDAFMREE 224
            ..||        .||...|   :|..|.:.:.| |.||.::.:|...|:..|:...|||...|..
 Frog   105 YEEE--------QRESKKPKLEMDHYLPSARTRCRRRTIYSKEQTLFLQDQFDLNPYPDFVSRCH 161

  Fly   225 LSQRLGLSEARVQVWFQNRRAKCRKHENQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALRSSS 289
            :::..|:.|.|:|||||||||:        |.....||:.|...|.|                  
 Frog   162 IAKITGIPEPRIQVWFQNRRAR--------HLLRATGSQVPHGNTSL------------------ 200

  Fly   290 VPSHPAAATSSNPQAPGVSG 309
            ....|.......||.|.:.|
 Frog   201 TEEEPRCFIYGEPQYPDMWG 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 23/56 (41%)
OAR 392..410 CDD:461067
sia2XP_002942206.3 COG5576 69..>183 CDD:227863 37/130 (28%)
Homeodomain 131..184 CDD:459649 22/60 (37%)
Blue background indicates that the domain is not in the aligned region.

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