DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and barx2

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_002934925.2 Gene:barx2 / 100488405 XenbaseID:XB-GENE-852581 Length:288 Species:Xenopus tropicalis


Alignment Length:256 Identity:66/256 - (25%)
Similarity:98/256 - (38%) Gaps:67/256 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 EHVETYSLSPTLHKAAVEPKPKNWLISED-------LDVDSQPEDPKMSGLPTASITECTEDSNT 154
            |.:..||:.|:|   .|.|:|.:......       |.|.::..:.....:||      :..|:.
 Frog    40 EKLSLYSVCPSL---LVRPRPLHSCTGSSSLRPYPLLSVITRQPNVVTHMVPT------SPSSHH 95

  Fly   155 PKLAPDKPLLPEECVSPEPSRNREH----CDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETH 215
            |.|:|..  |...|...|...:..|    .:...|:....|.|||||.||..||..||:.|::..
 Frog    96 PVLSPTH--LSPGCTRSETPASEVHQSSESEHEQTTPRMKKPRRSRTIFTELQLMGLEKKFQKQK 158

  Fly   216 Y---PDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQMHKGFLVGSRSPPIATPLEPCRVA 277
            |   ||   |.:|:|.|||::.:|:.|:||||.|.:|.       .|.|.:..|......|    
 Frog   159 YLSTPD---RLDLAQSLGLTQLQVKTWYQNRRMKWKKI-------VLKGGQEAPTKPKGRP---- 209

  Fly   278 PYVSLAALRSSSVPSH-------------PAAATSSNPQAPGVSGTSSSGKVVTVDS-PHN 324
                    :.:|:|:.             ....|..|.:..|      .|||...|. .||
 Frog   210 --------KKNSIPTSEEIEAEEKLNKLAQETETEVNEEEEG------QGKVTEKDEIVHN 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 28/58 (48%)
OAR 392..410 CDD:461067
barx2XP_002934925.2 Homeodomain 136..192 CDD:459649 28/58 (48%)
Blue background indicates that the domain is not in the aligned region.

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