DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and phox2a

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001239128.1 Gene:phox2a / 100486496 XenbaseID:XB-GENE-853857 Length:281 Species:Xenopus tropicalis


Alignment Length:249 Identity:82/249 - (32%)
Similarity:108/249 - (43%) Gaps:54/249 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 PLLPEECV-------SPEPSRNREHCDPLDTSLVN--TKQRRSRTNFTLDQLNELERLFEETHYP 217
            ||....|.       .|.|.....:....|.|.:|  .||||.||.||..||.||||:|.|||||
 Frog    53 PLTTANCTLGALRDHQPSPYSTVPYKFFSDPSGINEKRKQRRIRTTFTSSQLKELERVFAETHYP 117

  Fly   218 DAFMREELSQRLGLSEARVQVWFQNRRAKCRKHE-------NQMHKGFLVGSRSPPIATPLEP-- 273
            |.:.||||:.::.|:||||||||||||||.||.|       ...:.|.....:|.|.::..:.  
 Frog   118 DIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAANSKSGSSNNGGSGNKKSDPRSSSEDDES 182

  Fly   274 ----CRVAPYVSLAALRSSSVPSHPAAATSSNPQAPGVSGTSSSGKVVTVDSPHNHNPAISRSAI 334
                |...|         .|..|.|   |:.|..:||.|.:.|.|.|..:.|.|      :..|:
 Frog   183 KESNCSPTP---------DSTASLP---TAGNLNSPGGSLSPSPGAVSGLVSAH------TVQAL 229

  Fly   335 K-------QFSSTVAAAAAFSAFDPAIISVAAHQYAAAITN-----GTVPAGLF 376
            |       ..||:.:.|....|:.||  ......:|..::.     .|:.|.||
 Frog   230 KGPAWPGVPTSSSTSTAELLKAWQPA--EAVPGPFAGVLSTFHRKPNTLKANLF 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 38/55 (69%)
OAR 392..410 CDD:461067
phox2aNP_001239128.1 Homeodomain 93..149 CDD:459649 38/55 (69%)
Blue background indicates that the domain is not in the aligned region.

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