Protein Alignment CG34367 and hoxc3

DIOPT Version :10

• Sequence 1: NP_001097140.1
• Gene: CG34367 / 5740879
• FlyBaseID: FBgn0085396
• Length: 420
• Species: Drosophila melanogaster
• Sequence 2: XP_002936696.1
• Gene: hoxc3 / 100190990
• XenbaseID: XB-GENE-5997986
• Length: 394
• Species: Xenopus tropicalis
• Alignment Length: 347
• Identity: 82/347 - (23%)
• Similarity: 141/347 - (40%)
• Gaps: 67/347 - (19%)

  Fly    89 EESHSQREEHVETYSLSP------TLHKAAVEPKPKNWLISEDLDVDSQPEDPKM-SGLP-TASI 145
            ::.:...:::...:.|.|      ..||.....|..::.:||..:...||:.|.. |.|| :||.
 Frog    31 QQDYPSEDDYQPPFCLPPDTANGSASHKGEHSIKGIDFHLSEVSEQAQQPKSPNSDSPLPKSAST 95

  Fly   146 TECTEDSNTPKLAPD--------------KPLLPEECVSPEPSRNREHCDP-------LDTSLVN 189
            ..||...:|..::.|              |.:.|....:.:.|:.::...|       :|:|.::
 Frog    96 QSCTSKKSTGPVSSDVTSPNKKSKGSNMPKQIFPWMKETRQNSKQKKQAPPPADDAPAVDSSFLS 160

  Fly   190 TKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQM 254
            :..:|:||.:|..||.|||:.|....|.....|.|:::.|.|||.::::||||||.|.:|.
 Frog   161 SASKRARTAYTNSQLVELEKEFHFNRYLCRPRRLEMAKLLNLSERQIKIWFQNRRMKFKKD---- 221

  Fly   255 HKGFLVGSRSPPIATPLEPCRVAPYVSLAALRSS---SVPSHPAAATSSNPQAPGVSGTSSSGKV 316
            ||| ..|..||...:|.....:.||.....|...   .||    .||.:..::||     :...:
 Frog   222 HKG-KGGGGSPGGLSPSSSPSLMPYSGNLPLDGDCGYEVP----MATGAYNKSPG-----NMYGL 276

  Fly   317 VTVDSPHNHNPAISRSAIKQFSSTVAAAAAFSAFDPAIISVAAHQYAAA------------ITNG 369
            ....:|....|    ||.|::.....|    ..:||..:. ..:.|..:            :.||
 Frog   277 TAYSAPLFEGP----SAQKRYGPQSLA----PEYDPHSMQ-GDNNYDTSGLPNGQGYLGNYLENG 332

  Fly   370 TVPAGLFSVPQYSINLAAFAAA 391
            :....:||:|..|.....::.|
 Frog   333 SESCSMFSLPHPSSESMDYSCA 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34367	NP_001097140.1	Homeodomain	193..249	CDD:459649	24/55 (44%)
		OAR	392..410	CDD:461067	82/347 (24%)
hoxc3	XP_002936696.1	Homeodomain	164..220	CDD:459649	24/55 (44%)
		DUF4074	335..392	CDD:463833	5/20 (25%)