DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34458 and Ctrb1

DIOPT Version :10

Sequence 1:NP_001097340.1 Gene:CG34458 / 5740868 FlyBaseID:FBgn0085487 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_079859.2 Gene:Ctrb1 / 66473 MGIID:88559 Length:263 Species:Mus musculus


Alignment Length:234 Identity:91/234 - (38%)
Similarity:129/234 - (55%) Gaps:17/234 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SRIIGGQFAAPGQFPHQVSLQ-LNGRHHCGGSLISDTMIVTAAHCTMGQNPGQMKAIVGTNDLSA 93
            |||:.|:.|.||.:|.||||| ..|.|.|||||||:..:||||||.:     :...:|...:...
Mouse    32 SRIVNGEDAIPGSWPWQVSLQDRTGFHFCGGSLISENWVVTAAHCGV-----KTTDVVVAGEFDQ 91

  Fly    94 G----NGQTFNIAQFIIHPRYNPQSQDFDMSLIKLSSPVPMGGAVQTIQLADSDSNYAADTMAMI 154
            |    |.|...|||...:|::|..:...|::|:||::|......|..:.|...|.::.|.|:...
Mouse    92 GSDEENVQVLKIAQVFKNPKFNSFTVRNDITLLKLATPAQFSETVSAVCLPTVDDDFPAGTLCAT 156

  Fly   155 SGFGAINQN-LQLPNRLKFAQVQLWSRDYCNSQNIPGLTDRMVCAGHPSGQVSSCQGDSGGPLTV 218
            :|:|....| |:.|::|:.|.:.:.|...|.......:||.|:||| .|| ||||.|||||||..
Mouse   157 TGWGKTKYNALKTPDKLQQAALPIVSEAKCKESWGSKITDVMICAG-ASG-VSSCMGDSGGPLVC 219

  Fly   219 --DG--KLFGVVSWGFGCGAKGRPAMYTYVGALRSWIKQ 253
              ||  .|.|:||||.|..:...||:|..|.||..|:::
Mouse   220 QKDGVWTLAGIVSWGSGFCSTSTPAVYARVTALMPWVQE 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34458NP_001097340.1 Tryp_SPc 32..254 CDD:238113 89/232 (38%)
Ctrb1NP_079859.2 Tryp_SPc 34..259 CDD:238113 89/232 (38%)

Return to query results.
Submit another query.