DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34458 and tmprss2

DIOPT Version :10

Sequence 1:NP_001097340.1 Gene:CG34458 / 5740868 FlyBaseID:FBgn0085487 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001008623.1 Gene:tmprss2 / 494080 ZFINID:ZDB-GENE-041212-48 Length:486 Species:Danio rerio


Alignment Length:249 Identity:83/249 - (33%)
Similarity:137/249 - (55%) Gaps:14/249 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AVTFVHSDMDVAEESRIIGG-QFAAPGQFPHQVSLQLNGRHHCGGSLISDTMIVTAAHCT-MGQN 78
            ||:...:|...:..:||:|| ...:.|.:|.||||..:|||.||||:|:...|:|||||. ...|
Zfish   236 AVSLKCTDCGRSTGNRIVGGTTVTSKGVWPWQVSLHYSGRHLCGGSIITPYWILTAAHCVHQFSN 300

  Fly    79 PGQMKAIVG---TNDLSAGNGQTFNIAQFIIHPRYNPQSQDFDMSLIKLSSPVPMGGAVQTIQLA 140
            ||......|   .:::::.:|.:.|  :.:||. :||.:.:.|::|::|::.:.:...::.:.|.
Zfish   301 PGGWTVYAGYLTQSEMASASGNSVN--RIVIHD-FNPNTNENDIALMRLNTALTISTNIRPVCLP 362

  Fly   141 DSDSNYAADTMAMISGFGAINQNLQLPNRLKFAQVQLWSRDYCNSQNIPG--LTDRMVCAGHPSG 203
            :...::.|.....::|:||:.........|:.|::||.....|||:.:..  :||.|:|||..:|
Zfish   363 NKGMSFTAQQDCYVTGWGALFSGGSSSATLQEAKIQLIDSTICNSRPVYNGLITDTMICAGKLAG 427

  Fly   204 QVSSCQGDSGGPLTVDGK----LFGVVSWGFGCGAKGRPAMYTYVGALRSWIKQ 253
            .|.||||||||||..:.:    |.|..|||.||..:.:|.:|..|.....||.|
Zfish   428 GVDSCQGDSGGPLVTNVRSLWWLLGDTSWGDGCAVRNKPGVYGNVTYFLDWIYQ 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34458NP_001097340.1 Tryp_SPc 32..254 CDD:238113 79/233 (34%)
tmprss2NP_001008623.1 DUF3824 <18..>77 CDD:372351
LDLa 132..168 CDD:238060
SRCR_2 173..248 CDD:470597 3/11 (27%)
Tryp_SPc 252..482 CDD:238113 79/233 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.