DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34458 and Prss22

DIOPT Version :10

Sequence 1:NP_001097340.1 Gene:CG34458 / 5740868 FlyBaseID:FBgn0085487 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001100454.1 Gene:Prss22 / 302971 RGDID:1310880 Length:307 Species:Rattus norvegicus


Alignment Length:242 Identity:83/242 - (34%)
Similarity:130/242 - (53%) Gaps:20/242 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SRIIGGQFAAPGQFPHQVSLQLNGRHHCGGSLISDTMIVTAAHCTMG--QNPGQMKAIVGTNDLS 92
            :|::||:.:|..|:|..||:..||.|||.|||:::..:|:||||...  ..|.....::|...| 
  Rat    48 NRVVGGEDSADAQWPWIVSILKNGSHHCAGSLLTNRWVVSAAHCFSSNMDKPSPYSVLLGAWKL- 111

  Fly    93 AGN----GQTFNIAQFIIHPRYN-PQSQDFDMSLIKLSSPVPMGGAVQTIQLADSDSNYAADTMA 152
             ||    .|...||..:.||||: .:....|::|::|..|:.....:..|.|.||..:...:|..
  Rat   112 -GNPGPRSQKVGIASVLPHPRYSRKEGTHADIALVRLERPIQFSERILPICLPDSSVHLPPNTNC 175

  Fly   153 MISGFGAINQNLQL--PNRLKFAQVQLWSRDYCNSQNIPG-----LTDRMVCAGHPSGQVSSCQG 210
            .|:|:|:|...:.|  |..|:..:|.:...:.|.|....|     :|:.|:|||:..|:..:|.|
  Rat   176 WIAGWGSIQDGVPLPRPQTLQKLKVPIIDPELCKSLYWRGAGQEAITEDMLCAGYLEGKRDACLG 240

  Fly   211 DSGGPL--TVDGK--LFGVVSWGFGCGAKGRPAMYTYVGALRSWIKQ 253
            ||||||  .||..  |.|::|||.||..:.||.:||.:.|.|.|:::
  Rat   241 DSGGPLMCQVDDHWLLTGIISWGEGCAERNRPGVYTSLLAHRPWVQR 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34458NP_001097340.1 Tryp_SPc 32..254 CDD:238113 82/240 (34%)
Prss22NP_001100454.1 Tryp_SPc 50..288 CDD:238113 82/240 (34%)

Return to query results.
Submit another query.