DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34458 and St14

DIOPT Version :10

Sequence 1:NP_001097340.1 Gene:CG34458 / 5740868 FlyBaseID:FBgn0085487 Length:257 Species:Drosophila melanogaster
Sequence 2:XP_036010597.1 Gene:St14 / 19143 MGIID:1338881 Length:875 Species:Mus musculus


Alignment Length:247 Identity:86/247 - (34%)
Similarity:133/247 - (53%) Gaps:19/247 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EESRIIGGQFAAPGQFPHQVSLQLNGRHH-CGGSLISDTMIVTAAHCTMGQNPGQMK-------- 83
            :::|::||..|..|::|.||||...|:.| ||.||||...:|:||||.  |:....|        
Mouse   631 KQARVVGGTNADEGEWPWQVSLHALGQGHLCGASLISPDWLVSAAHCF--QDDKNFKYSDYTMWT 693

  Fly    84 AIVGTND---LSAGNGQTFNIAQFIIHPRYNPQSQDFDMSLIKLSSPVPMGGAVQTIQLADSDSN 145
            |.:|..|   .||...|...:.:.|.||.:|..:.|:|::|::|...|.....|:.|.|.|:...
Mouse   694 AFLGLLDQSKRSASGVQELKLKRIITHPSFNDFTFDYDIALLELEKSVEYSTVVRPICLPDATHV 758

  Fly   146 YAADTMAMISGFGAINQNLQLPNRLKFAQVQLWSRDYCNSQNIPGLTDRMVCAGHPSGQVSSCQG 210
            :.|.....::|:|...:.......|:..::::.::..|.......:|.||:|.|..||.|.||||
Mouse   759 FPAGKAIWVTGWGHTKEGGTGALILQKGEIRVINQTTCEDLMPQQITPRMMCVGFLSGGVDSCQG 823

  Fly   211 DSGGPLT---VDGKLF--GVVSWGFGCGAKGRPAMYTYVGALRSWIKQNANV 257
            ||||||:   .||::|  ||||||.||..:.:|.:||.:..:|.|||::..|
Mouse   824 DSGGPLSSAEKDGRMFQAGVVSWGEGCAQRNKPGVYTRLPVVRDWIKEHTGV 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34458NP_001097340.1 Tryp_SPc 32..254 CDD:238113 84/238 (35%)
St14XP_036010597.1 SEA 108..198 CDD:460188
CUB 247..352 CDD:238001
CUB 360..464 CDD:238001
LDLa 474..506 CDD:238060
LDLa 512..543 CDD:238060
LDLa 545..579 CDD:238060
LDLa 587..622 CDD:238060
Tryp_SPc 635..872 CDD:238113 84/238 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.