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Protein Alignment lmgA and rbx1
DIOPT Version :9
Sequence 1: | NP_001097122.1 |
Gene: | lmgA / 5740853 |
FlyBaseID: | FBgn0250903 |
Length: | 85 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001077013.1 |
Gene: | rbx1 / 449846 |
ZFINID: | ZDB-GENE-041008-106 |
Length: | 108 |
Species: | Danio rerio |
Alignment Length: | 83 |
Identity: | 31/83 - (37%) |
Similarity: | 44/83 - (53%) |
Gaps: | 8/83 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 IKSWTGVATWRWIANDENCGICRMSFESTCPEC-----ALPGDDCPLVWGVCSHCFHMHCIVKWL 64
:|.|..||.|.|....:||.|||......|.|| :...::|.:.||||:|.||.|||.:||
Zfish 24 VKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL 88
Fly 65 NLQPLNKQCPMCRQSWKF 82
..:.: ||:..:.|:|
Zfish 89 KTRQV---CPLDNREWEF 103
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5194 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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