Protein Alignment lmgA and Roc1a

DIOPT Version :9

• Sequence 1: NP_001097122.1
• Gene: lmgA / 5740853
• FlyBaseID: FBgn0250903
• Length: 85
• Species: Drosophila melanogaster
• Sequence 2: NP_001138143.2
• Gene: Roc1a / 31014
• FlyBaseID: FBgn0025638
• Length: 136
• Species: Drosophila melanogaster
• Alignment Length: 82
• Identity: 31/82 - (37%)
• Similarity: 42/82 - (51%)
• Gaps: 8/82 - (9%)

  Fly     6 KSWTGVATWRWIANDENCGICRMSFESTCPEC-----ALPGDDCPLVWGVCSHCFHMHCIVKWLN 65
            |.|..||.|.|....:||.|||......|.||     :...::|.:.||||:|.||.|||.:||.
  Fly    53 KQWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK 117

  Fly    66 LQPLNKQCPMCRQSWKF 82
            .:.:   ||:..:.|.|
  Fly   118 TRQV---CPLDNREWDF 131

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lmgA	NP_001097122.1	RING_Ubox	1..82	CDD:418438	30/80 (38%)
Roc1a	NP_001138143.2	APC11	53..136	CDD:227521	31/82 (38%)
		zf-rbx1	53..126	CDD:289448	29/75 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463170
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5194
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11210
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.840