Protein Alignment lmgA and apc11

DIOPT Version :9

• Sequence 1: NP_001097122.1
• Gene: lmgA / 5740853
• FlyBaseID: FBgn0250903
• Length: 85
• Species: Drosophila melanogaster
• Sequence 2: NP_593423.1
• Gene: apc11 / 2543187
• PomBaseID: SPAC343.03
• Length: 94
• Species: Schizosaccharomyces pombe
• Alignment Length: 81
• Identity: 40/81 - (49%)
• Similarity: 50/81 - (61%)
• Gaps: 1/81 - (1%)

  Fly     1 MKVTIKSWTGVATWRW-IANDENCGICRMSFESTCPECALPGDDCPLVWGVCSHCFHMHCIVKWL 64
            |||.|..:..:|.|.| ...|:.|||||:.|:..||:|..|||:||:|||.|.|.||.|||..||
pombe     1 MKVKILRYHAIANWTWDTPKDDVCGICRVPFDGCCPQCTSPGDNCPIVWGKCKHIFHAHCIQNWL 65

  Fly    65 NLQPLNKQCPMCRQSW 80
            .......||||.||::
pombe    66 ATSGSQGQCPMDRQTF 81

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lmgA	NP_001097122.1	RING_Ubox	1..82	CDD:418438	40/81 (49%)
apc11	NP_593423.1	zf-ANAPC11	1..85	CDD:289620	40/81 (49%)
		zf-rbx1	2..78	CDD:289448	37/75 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	99	1.000	Domainoid score	I1842
eggNOG	1	0.900	-	-		E1_COG5194
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H41136
Inparanoid	1	1.050	99	1.000	Inparanoid score	I1667
OMA	1	1.010	-	-		QHG53620
OrthoFinder	1	1.000	-	-		FOG0004746
OrthoInspector	1	1.000	-	-		oto102134
orthoMCL	1	0.900	-	-		OOG6_103498
Panther	1	1.100	-	-	LDO	PTHR11210
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R67
SonicParanoid	1	1.000	-	-		X3902
TreeFam	1	0.960	-	-
	14	13.860