DRSC/TRiP Functional Genomics Resources

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Protein Alignment lmgA and rnf7

DIOPT Version :10

Sequence 1:NP_001097122.1 Gene:lmgA / 5740853 FlyBaseID:FBgn0250903 Length:85 Species:Drosophila melanogaster
Sequence 2:NP_001107733.2 Gene:rnf7 / 100135737 XenbaseID:XB-GENE-942277 Length:99 Species:Xenopus tropicalis


Alignment Length:79 Identity:29/79 - (36%)
Similarity:41/79 - (51%) Gaps:5/79 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TIKSWTGVATWRWIANDENCGICRMSFESTCPECALPG--DDCPLVWGVCSHCFHMHCIVKWLNL 66
            ::|.|..||.|.|....:.|.|||:.....|..|....  :||.:|||.|:|.||..|:..|:. 
 Frog    17 SLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVK- 80

  Fly    67 QPLNKQCPMCRQSW 80
              .|.:||:|:|.|
 Frog    81 --QNNRCPLCQQDW 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lmgANP_001097122.1 RING_Ubox 1..82 CDD:473075 29/79 (37%)
rnf7NP_001107733.2 RING-H2_RBX2 33..92 CDD:438129 22/61 (36%)

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