DRSC/TRiP Functional Genomics Resources

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Protein Alignment JYalpha and atp2b2

DIOPT Version :9

Sequence 1:NP_001104092.2 Gene:JYalpha / 5740846 FlyBaseID:FBgn0267363 Length:1009 Species:Drosophila melanogaster
Sequence 2:NP_001116710.1 Gene:atp2b2 / 557430 ZFINID:ZDB-GENE-061016-1 Length:1253 Species:Danio rerio


Alignment Length:1088 Identity:296/1088 - (27%)
Similarity:442/1088 - (40%) Gaps:305/1088 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LLERLKTDPNMGLSFVEAKL--RLEINGPNILTPQPPTPKWIVFLKTMFGGFAILLWAG-----S 97
            |.:||||.|..||:.:...|  |.|:.|.|::.|:.|        ||    |..|:|..     .
Zfish    53 LCQRLKTSPTEGLAGLATDLDKRKEVFGRNLIPPKKP--------KT----FLQLVWEALQDVTL 105

  Fly    98 FLCFVGYLIQLQTQ-HEPPDD---------------------NLYLGIALTVLVIVTGLFTYFQV 140
            .:..:..||.|... ::||.:                     ....|.|:.:.|:...|.|.|..
Zfish   106 IILEIAALISLGLSFYQPPGEGNTDACGDAKAGAEDEGESEAGWIEGAAILLSVVCVVLVTAFND 170

  Fly   141 HKSSSIMDSFKNLVPQYA--TVIREGEINTVTSDEIVKGDIVEVKFGDRVPADIRILEAHGLKVD 203
            ..........::.:.|..  .|:|.|::..:...:|:.|||.::|:||.:|||..:::.:.||:|
Zfish   171 WSKEKQFRGLQSRIEQEQKFQVVRGGQVIQLPVADILVGDIAQIKYGDLLPADGVLIQGNDLKID 235

  Fly   204 NSSLTGESEPQVRSTEFTHENPLETKNLAFFS-TNVLEGTCRGVVIATGDSTVMGRIANL--AAG 265
            .|||||||:         |......|:....| |:|:||:.|.||.|.|.::..|.|..|  |.|
Zfish   236 ESSLTGESD---------HVRKAADKDPMLLSGTHVMEGSGRMVVTAVGVNSQSGIIFTLLGAGG 291

  Fly   266 ------------------LDDVQSPISREIQ---------------------------------- 278
                              |.|...|.|..|.                                  
Zfish   292 EEEEKKEKKGQALEDGHPLPDCSHPSSHPIATIATDGAASANTPANTSLVNGKMQDGNMENNQTK 356

  Fly   279 --------------------------------------------------------LFIRFITIF 287
                                                                    |.:..||:.
Zfish   357 VKKQDGAAAMEMQPLKSAEGGETEEKEKKKTSVSKKEKSVLQGKLTKLAVQIGKAGLVMSAITVI 421

  Fly   288 AIILGLSFFAISLTLGYE----------FIDAVV--FLIG--IIVANVPEGLLVTVTVCLTLTAK 338
            .::|   :|||...:..:          :|...|  |:||  ::|..|||||.:.||:.|..:.|
Zfish   422 ILVL---YFAIDTFVRQKRPWLTECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVK 483

  Fly   339 RMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWYDQI----IVESDTTESFRGSH 399
            :|...|.||::|:|.||:|:.:.||||||||||.||||...::...:    |.|..:..|     
Zfish   484 KMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQVYVADVHYKTIPEPTSLPS----- 543

  Fly   400 FKIEDKSFNALFMCAALCNS---AEFKGGQDDIPVFKKDVNGNASEAALLKFTETIFAGIGAFRQ 461
             |..|...||:.:.:|....   |:.:||   :|   |.| ||.:|...|.....:.......|.
Zfish   544 -KTLDILVNAISLNSAYTTKILPADKEGG---LP---KQV-GNKTECGFLGLVLDVKRDYQTIRN 600

  Fly   462 K--HIKLTEI-PFNSTEKYQVSVHEFNSSDGYFIVEMKGAPERILDRCSTIIIQ-GLSVELTPTL 522
            :  ..||.:: .|||..|...:|  ....||.|.:..|||.|.||.:||.|:.: |......|..
Zfish   601 QIPEEKLYKVYTFNSVRKSMSTV--IKLPDGSFRMYSKGASEIILKKCSRILSEVGEPRVFRPRD 663

  Fly   523 KLEFEEAYLE---MGGMGERVLGFADLLLPMSKYPISYEFSADP-PNFPLEN-----LRFLGLIS 578
            :.|..:..:|   ..|:....:|:.|             |..|| ||:..||     |..:.::.
Zfish   664 RDEMVKKVIEPMACDGLRTICVGYRD-------------FPKDPEPNWEDENNILTDLTAICVVG 715

  Fly   579 LIDPPRAAVPDAVAKCRSAGVRVIMVTGDHPITAKAIARSVGIITTPTAEDIAKQRGVTVLDIDS 643
            :.||.|..||||:.||:.||:.|.|||||:..||:|||...|||          ..|...|.||.
Zfish   716 IEDPVRPEVPDAIQKCQRAGITVRMVTGDNINTARAIAIKCGII----------HPGEDFLCIDG 770

  Fly   644 RQATAIVVHGGELREMKAEELDAVIYYHNEIVFARTSPQQKLIIVEAC-------QRRGEIVAVT 701
            ::....:  ..|..|::.|.:|.|  :....|.||:||..|..:|:..       ||  ::||||
Zfish   771 KEFNRRI--RNEKGEVEQERIDKV--WPKLRVLARSSPTDKHTLVKGIIDSTLVDQR--QVVAVT 829

  Fly   702 GDGVNDSPALKRADIGVAMGISGSDVSKQAADMILLDDNFASIVVGIEEGRIIFDNLKKSIAYTL 766
            |||.||.||||:||:|.||||:|:||:|:|:|:||.||||:|||..:..||.::|::.|.:.:.|
Zfish   830 GDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQL 894

  Fly   767 TSNLPEIVPFLFFVIF-------DIPLALGTIAILCIDIGTDMLPAISLAYEKAESDIMARMP-- 822
            |.|:..::     |.|       |.||.  .:.:|.:::..|...:::||.|.....::.|.|  
Zfish   895 TVNVVAVI-----VAFTGACITQDSPLK--AVQMLWVNLIMDTFASLALATEPPTESLLMRKPYG 952

  Fly   823 -RDPFEDRLVNKKLILMAYLQIGVIQTVACFFTFFAIMAEHGFPPSRLKGIREDWDSKNVEDLED 886
             ..|.....:.|.:     |..||.|.|..|...|  :.|..|          |.||.....|..
Zfish   953 RNKPLISSTMTKNI-----LGHGVYQLVIIFSLLF--VGEQIF----------DIDSGRNAPLHS 1000

  Fly   887 GYGQEWT--------------------YRERKVLEYTAGTGFFVSIVV 914
            ...:.:|                    :.||.|.:.......|.||||
Zfish  1001 PPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCSIVV 1048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JYalphaNP_001104092.2 ATPase-IIC_X-K 17..1009 CDD:273445 296/1088 (27%)
Cation_ATPase_N 29..102 CDD:214842 20/68 (29%)
E1-E2_ATPase 123..354 CDD:278548 79/357 (22%)
Cation_ATPase 416..509 CDD:289987 29/98 (30%)
COG4087 <673..738 CDD:226572 37/71 (52%)
Cation_ATPase_C 785..994 CDD:279079 33/153 (22%)
atp2b2NP_001116710.1 ATPase-IIB_Ca 9..1096 CDD:273668 296/1088 (27%)
Cation_ATPase_N 48..115 CDD:279080 21/73 (29%)
E1-E2_ATPase 191..499 CDD:278548 73/319 (23%)
Cation_ATPase 560..649 CDD:289987 29/97 (30%)
HAD 657..840 CDD:289480 68/211 (32%)
Cation_ATPase_C 914..1092 CDD:279079 33/154 (21%)
ATP_Ca_trans_C 1137..1184 CDD:289209
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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