DRSC/TRiP Functional Genomics Resources

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Protein Alignment JYalpha and catp-6

DIOPT Version :9

Sequence 1:NP_001104092.2 Gene:JYalpha / 5740846 FlyBaseID:FBgn0267363 Length:1009 Species:Drosophila melanogaster
Sequence 2:NP_001255430.2 Gene:catp-6 / 177822 WormBaseID:WBGene00012341 Length:1267 Species:Caenorhabditis elegans


Alignment Length:1183 Identity:258/1183 - (21%)
Similarity:427/1183 - (36%) Gaps:337/1183 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 INGKEKKKDIQS----FKKDVETDNHKIPVDELLERLKTDPNMGLSFVEAKLRLEINGPNILTPQ 72
            :|..|...:|..    :|...|..| :||...||  ..::.|.||:..|...|||..|.|.:..|
 Worm   125 LNSDESVDEISDNDNCWKTSFEIAN-RIPCRSLL--AVSESNFGLTLSEISRRLEFYGRNEIVVQ 186

  Fly    73 --PPTPKWIVFLKTM--------FGGFAILLWAGSFLCFVGYLIQLQTQHEPPDDNLYLG-IALT 126
              |     |::|..|        |..|::.:|......:...||.:          |.|| |.:.
 Worm   187 LRP-----ILYLLVMEVITPFYVFQIFSVTVWYNDEYAYYASLIVI----------LSLGSIVMD 236

  Fly   127 VLVIVT-GLFTYFQVHKSSSIMDSFKNLVPQYATVIREGEINTVTSDEIVKGDIVEVKFGDRVPA 190
            |..|.| .:.....||.:.|:            .|||||...|:.||::|.|||:          
 Worm   237 VYQIRTQEIRLRSMVHSTESV------------EVIREGTEMTIGSDQLVPGDIL---------- 279

  Fly   191 DIRILEAHG-------------LKVDNSSLTGESEP--QVRSTEFTHENPL----ETKNLAFFST 236
               ::..||             :.|:.|.|||||.|  :|..|:.|:::..    .:||:.|..|
 Worm   280 ---LIPPHGCLMQCDSVLMNGTVIVNESVLTGESVPITKVALTDETNDSVFNIEKNSKNVLFCGT 341

  Fly   237 NVLE------GTCRGVVIATGDSTVMGRIANLAAGLDDVQSPISREIQLFIRFITIFAIILGLSF 295
            .||:      ...:.:|:.|..||:.|::.........|....::::   .:||...|.|.|..|
 Worm   342 QVLQTRFYRGKKVKAIVLRTAYSTLKGQLVRSIMYPKPVDFRFTKDL---FKFILFLACISGCGF 403

  Fly   296 ---FAISLTLGYEFIDAVVFLIGIIVANVPEGLLVTVTVCLTLTAKRMASKNCLVKNLEAVETLG 357
               ..:.:..|......:|..:.||...||..|...::|.:.....|:..|.....:...:.|.|
 Worm   404 IYTIIVMIMRGNTLRRIIVRSLDIITITVPPALPAAMSVGIINAQLRLKKKEIFCISPSTINTCG 468

  Fly   358 STSTICSDKTGTLTQNR---------MTVAHLWYDQIIVESDTTESFRGSHFKIEDKS---FNA- 409
            :.:.:|.|||||||::.         |:..:....::.:|......|.|...::..::   |:. 
 Worm   469 AINVVCFDKTGTLTEDGLDFHVVRPVMSAVNQEIQKVKLEKSNRTEFMGEMTELTSRNGLPFDGD 533

  Fly   410 LFMCAALCNS-----AEFKGGQDDIPVFKK-------DVNGNASE---------AALLKFTETIF 453
            |....|.|:|     ....|...|:.:|:|       .:.|:..|         .:::|.|:...
 Worm   534 LVKAIATCHSLTRINGVLHGDPLDLILFQKTGWTMEEGIEGDIEEETQRFDNVQPSIIKPTDDKS 598

  Fly   454 AGIGAFRQKHIKLTEIPFNSTEKYQVSVHEFNSSD---GYFIVEMKGAPERILDRCSTIIIQGLS 515
            |.....||       ..|:|:.: ::||..|:..:   ...::..||:||.||..|....:.   
 Worm   599 AEYSVIRQ-------FTFSSSLQ-RMSVIVFDPREDRPDNMMLYSKGSPEMILSLCDPNTVP--- 652

  Fly   516 VELTPTLKLEFEEAYLEMGGMGERVLGFADLLLPMSKYPISYEFS------ADPPNFPLENLRFL 574
                       |:..|::....:.  ||.  |:.:::.|:...|:      .|.....||   .|
 Worm   653 -----------EDYLLQVNSYAQH--GFR--LIAVARRPLDLNFNKASKVKRDAVECDLE---ML 699

  Fly   575 GLISLIDPPRAAVPDAVAKCRSAGVRVIMVTGDHPITAKAIARSVGIIT---------------- 623
            |||.:.:..:......:.:...|.:|.:|||||:.:|..::||..|||.                
 Worm   700 GLIVMENRVKPVTLGVINQLNRANIRTVMVTGDNLLTGLSVARECGIIRPSKRAFLVEHVPGELD 764

  Fly   624 --------------------------------------------TPTAEDIAKQRGVTVLDID-- 642
                                                        :||..::.....||...:.  
 Worm   765 EYGRTKIFVKQSVSSSDEVIEDDASVSISMCSSTWKGSSEGDGFSPTNTEVETPNPVTADSLGHL 829

  Fly   643 ---------SRQATAIVVHGGELREMKAEELDAVIYYHNEIVFARTSPQQKLIIVEACQRRGEIV 698
                     |....|::||  |..|: .::|.:|.     .||||.:|.||..:||..|:....|
 Worm   830 IASSYHLAISGPTFAVIVH--EYPEL-VDQLCSVC-----DVFARMAPDQKQSLVEQLQQIDYTV 886

  Fly   699 AVTGDGVNDSPALKRADIGVAMGISGSDVSKQAADMILLDDNFASIVVGIEEGRII----FDNLK 759
            |:.|||.||..|||.|..|:::..:.:.:   ||.......:...:...|.|||..    |...|
 Worm   887 AMCGDGANDCAALKAAHAGISLSDAEASI---AAPFTSKVPDIRCVPTVISEGRAALVTSFGIFK 948

  Fly   760 KSIAYTLT-----------SNLPEIVPFLFFVIFDIPLALGTIAILCIDIGTDMLPAISLAYEKA 813
            ....|:||           ||:.....|::..:|       .|.:..:..|.  .||.   |..|
 Worm   949 YMAGYSLTQFVTVMHLYWISNILTDGQFMYIDMF-------LITMFALLFGN--TPAF---YRLA 1001

  Fly   814 ESDIMARMPRDPFEDRLVNKKLILMAYLQIGVIQTVACFFTFFAIMAEHGFPPSRLKGIREDWDS 878
            .:....|:........:|.:.:|      |||:|    |..||:...:..|.|         :..
 Worm  1002 HTPPPTRLLSIASMTSVVGQLII------IGVVQ----FIVFFSTSQQPWFTP---------YQP 1047

  Fly   879 KNVEDLEDGYGQEWTYRERKVLEYTAGTGFFVSIVVTQVFDLLICKTRRNSILQQG---MGNHVL 940
            ...:::||....:             ||..|    ...:|..:|...    :..:|   .||...
 Worm  1048 PVDDEVEDKRSMQ-------------GTALF----CVSMFQYIILAL----VYSKGPPFRGNLWS 1091

  Fly   941 NFALVLEFIIACLLC-YVPVFE-----KTL---RMYSIKFIWWIY-------AFPFGLLIFFFDE 989
            |..:....|.|.||| ::.::.     |||   .:.|:.|..:|.       |..:|....|.| 
 Worm  1092 NKPMCALTIFATLLCLFIVIWPTELVLKTLGNVELPSLTFRIFIVIVGAVNAAVSYGFETLFVD- 1155

  Fly   990 SRRFLIRRNPGGW 1002
              .||:    |.|
 Worm  1156 --FFLL----GYW 1162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JYalphaNP_001104092.2 ATPase-IIC_X-K 17..1009 CDD:273445 256/1178 (22%)
Cation_ATPase_N 29..102 CDD:214842 23/82 (28%)
E1-E2_ATPase 123..354 CDD:278548 60/259 (23%)
Cation_ATPase 416..509 CDD:289987 25/116 (22%)
COG4087 <673..738 CDD:226572 24/64 (38%)
Cation_ATPase_C 785..994 CDD:279079 44/227 (19%)
catp-6NP_001255430.2 P-ATPase-V 18..1137 CDD:273738 250/1149 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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