DRSC/TRiP Functional Genomics Resources

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Protein Alignment JYalpha and mca-3

DIOPT Version :10

Sequence 1:NP_001104092.2 Gene:JYalpha / 5740846 FlyBaseID:FBgn0267363 Length:1009 Species:Drosophila melanogaster
Sequence 2:NP_001380077.1 Gene:mca-3 / 177089 WormBaseID:WBGene00003153 Length:1234 Species:Caenorhabditis elegans


Alignment Length:1101 Identity:305/1101 - (27%)
Similarity:491/1101 - (44%) Gaps:241/1101 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KKDVETDNHKIPVDELLERLKTDPNMGLSFVEAKL--RLEINGPNILTPQPPTPKWIVFLKTMFG 87
            |:.:|||..  ....|.||||||||.||...|.:|  |..:.|.|.:.|.||.    .||:    
 Worm    23 KEKIETDYG--GTTGLCERLKTDPNNGLPNNEEELERRRNVFGANEIPPHPPK----CFLQ---- 77

  Fly    88 GFAILLWAG-----SFLCFVGYLIQLQTQ-HEPP-------DDNLY-----LGIALTVLVIVTGL 134
                |:|..     ..:..|..::.|... :.||       ||:.:     .|:|:.:.|||..|
 Worm    78 ----LVWEALQDVTLVILLVSAIVSLALSFYRPPGEDTAGSDDSEHDAGWIEGVAILISVIVVVL 138

  Fly   135 FTYFQVHKSSSIMDSFKNLVPQYAT-----VIREGEINTVTSDEIVKGDIVEVKFGDRVPADIRI 194
            .|....:....   .|:.|..:..|     |:|.|:...|..:|:|.|||.::|:||.:|:|..|
 Worm   139 VTALNDYTKER---QFRGLQAKIETEHRFFVLRGGQSVQVVVNELVVGDIAQIKYGDLIPSDGII 200

  Fly   195 LEAHGLKVDNSSLTGESEPQVRSTEFTHENPLETKNLAFFSTNVLEGTCRGVVIATGDSTVMGRI 259
            ::::.||:|.|||||||: |:|.:.       |...:....|:|:||:.:.:|.|.|.::..|.|
 Worm   201 IQSNDLKMDESSLTGESD-QIRKSP-------EHDPIILSGTHVMEGSGKMLVTAVGVNSQTGII 257

  Fly   260 ANL----------------------AAGLDD---------------------------------- 268
            ..|                      |:|.::                                  
 Worm   258 MTLLGAAKTVAEEERKTAKREGGDGASGAEEGTAQALLDSKGDEAMANGKAVAAAESDGKKERSV 322

  Fly   269 VQSPISR-EIQL-----FIRFITIFAIILG--LSFFAI-----SLTLGYEFIDAVVFLIGIIVAN 320
            :|:.::| .||:     |:...|:..:|:.  :|.:||     ||.....||:.::..:.::|..
 Worm   323 LQAKLTRLAIQIGYAGSFVAGCTVLILIIRFCISRYAIDGKSFSLADFQHFINFLIIGVTVLVVA 387

  Fly   321 VPEGLLVTVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWYDQI 385
            |||||.:.||:.|..:.|:|...|.||::|:|.||:|:.:.||||||||||.|||||...:.:.:
 Worm   388 VPEGLPLAVTLSLAYSVKKMMLDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSFVNDV 452

  Fly   386 IVESDTTESFRGSHFKIE--DKSFNALFMCAALCNSAEFKGGQDDIPVFKKDVN------GNASE 442
            ..: ||.        |||  |::...|.|.....||:.   ....||  .|.:.      ||.:|
 Worm   453 HYK-DTP--------KIESLDQNTAKLMMDCISINSSY---SSQVIP--PKQLGEQATQLGNKTE 503

  Fly   443 AALLKFTETIFAGIGAFRQKHIKLTEIP----FNSTEKYQVSVHEFNSSDGYFIVEMKGAPERIL 503
            ..:|.|...:.......|.:|.:.| ||    |||..|...:|  .|..||.:.|..|||.|.:.
 Worm   504 CGMLGFVLALGKSYQEIRDRHPEET-IPKVYTFNSVRKSMSTV--INLPDGGYRVFSKGASEIVT 565

  Fly   504 DRCSTIIIQGLSVELTPTLKLEFEEAYLE----MGGMGERVL--GFADLLLPMSK----YPISYE 558
            .||...:  |.:..||.....:.|....:    |...|.|.:  .:.| .:|.||    ..|:|.
 Worm   566 KRCKYFL--GKNGTLTKFSSKDAENLVRDVIEPMASDGLRTICVAYKD-YVPSSKKTADNQIAYS 627

  Fly   559 FSADPPN--FPLENLRFLGLISLIDPPRAAVPDAVAKCRSAGVRVIMVTGDHPITAKAIARSVGI 621
            ...|..|  ..:.::..:.::.:.||.|..||.|:.:|:.||:.|.|||||:..||::||.:.||
 Worm   628 SEPDWENEEMIVGDMTAIAVLGIQDPVRPEVPAAITRCQEAGITVRMVTGDNINTARSIATACGI 692

  Fly   622 ITTPTAEDIAKQRGVTVLDIDSRQATAIVVHGGELREMKAEELDAVIYYHNEIVFARTSPQQKLI 686
            :          :.|...:.::.::..|.:  ..|..|:..|:||.:  :....|.||..|..|.:
 Worm   693 L----------KPGEDFIALEGKEFNARI--RDENGEVSQEKLDLI--WPKLRVLARAQPSDKYV 743

  Fly   687 IVEA-----CQRRGEIVAVTGDGVNDSPALKRADIGVAMGISGSDVSKQAADMILLDDNFASIVV 746
            :|:.     .....|:|||||||.||.||||:||:|.||||:|:||:|:|:|:||.||||.|||.
 Worm   744 LVKGIIDSRVTDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVK 808

  Fly   747 GIEEGRIIFDNLKKSIAYTLTSNLPEIVPFLFFV----IFDIPLALGTIAILCIDIGTDMLPAIS 807
            .:..||.::|::.|.:.:.||.|:..:|  :.||    |.|.||.  .:.:|.:::..|.|.:::
 Worm   809 AVMWGRNVYDSIAKFLQFQLTVNVVAVV--VAFVGACAIQDTPLK--AVQMLWVNLIMDTLASLA 869

  Fly   808 LAYEKAESDIMARMP---RDPFEDRLVNKKLILMAYLQIGVIQTV-----ACFFTFFAIMAEHGF 864
            ||.|....:::.|.|   ..|...|.:.|.::..|..|:.::.|:     .||.......|....
 Worm   870 LATEMPTEELLKRKPYGRTSPLISRTMCKNILGHAVYQLVILFTLIFYGEVCFNIPSGRWAPLHS 934

  Fly   865 PPSRLKGIREDWDSKNVEDLEDGYGQEWTYRERKVLEYTAGTGFFVSIVVTQVFDLLICKTRRNS 929
            |||:                                .:|.....||.:.:....:.......|| 
 Worm   935 PPSK--------------------------------HFTIVFNTFVMMTLFNEINARKIHGERN- 966

  Fly   930 ILQQGMGNHVLNFALVLEFIIACLLCYVPVFEKTLRMYSIKFI----W-WIYAFPFGLLIF 985
             :.:|:.::.:.:.:    .||.::..|.:.:...|.:|...:    | |..||..|.|::
 Worm   967 -IFKGLFSNPIYYVI----WIATMISQVVIIQFGGRWFSTSALNTTEWLWCLAFGVGTLLW 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JYalphaNP_001104092.2 P-type_ATPase_Na-K_like 51..1006 CDD:319794 292/1075 (27%)
mca-3NP_001380077.1 P-type_ATPase_Ca_PMCA-like 55..896 CDD:319776 262/901 (29%)
Cation_ATPase_C 849..1026 CDD:376368 39/214 (18%)
ATP_Ca_trans_C 1066..1108 CDD:463575
Blue background indicates that the domain is not in the aligned region.

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