DRSC/TRiP Functional Genomics Resources

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Protein Alignment JYalpha and atp2c1

DIOPT Version :9

Sequence 1:NP_001104092.2 Gene:JYalpha / 5740846 FlyBaseID:FBgn0267363 Length:1009 Species:Drosophila melanogaster
Sequence 2:XP_002937789.2 Gene:atp2c1 / 100487845 XenbaseID:XB-GENE-968174 Length:961 Species:Xenopus tropicalis


Alignment Length:977 Identity:281/977 - (28%)
Similarity:459/977 - (46%) Gaps:151/977 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IQSFKKDVETDNHKIPVDELLERLKTDPNMGLSFVEAKLRLEINGPNILTPQPPTPKWIVFLKTM 85
            :.|.||..|     :||.|:...||.|...||:..|...|...:|.|........|.|..:::..
 Frog    64 VLSSKKASE-----LPVSEVAWILKADLQSGLNNPEVCHRRAAHGWNEFDISEGEPLWKKYIEQF 123

  Fly    86 FGGFAILLWAGSFLCFVGYLIQLQTQHEPPDDNLYLGIALTVLVIVTGLFTYFQVHKSSSIMDSF 150
            .....:||.|.:.:..      |..|.   ||    .:::||.:::.....:.|.::|...::..
 Frog   124 KNPLLMLLLASAVISI------LMQQF---DD----AVSITVAILIVVTVAFVQEYRSEKSLEEL 175

  Fly   151 KNLVPQYATVIREGEINTVTSDEIVKGDIVEVKFGDRVPADIRILEAHGLKVDNSSLTGESEPQV 215
            ..|||.....||||.:....:.::|.||.|.:..|||||||:|:.||..|.||.||||||:.|..
 Frog   176 SKLVPPECHCIREGRMEHTLARDLVPGDTVCLTVGDRVPADLRLFEAMDLSVDESSLTGETAPCA 240

  Fly   216 RSTE----FTHENPLETKNLAFFSTNVLEGTCRGVVIATGDSTVMGRIANLAAGLDDVQSPISRE 276
            :||.    .::.:.....|:||..|.|..|..:|:||.||:::..|.:..:....:..::|:.:.
 Frog   241 KSTAPQPCASNGDLTSRSNIAFMGTLVRCGKAKGIVIGTGENSEFGEVFKMMQAEEAPKTPLQKS 305

  Fly   277 IQLFIRFITIFAI-ILGLSFFAISLTLGYEFIDAVVFLIGIIVANVPEGLLVTVTVCLTLTAKRM 340
            :.:..:.:::::. |:|: ...:....|...:|.....:.:.||.:||||.:.|||.|.|...||
 Frog   306 MDILGKQLSLYSFGIIGV-IMLVGWLQGKHILDMFTIGVSLAVAAIPEGLPIVVTVTLALGVMRM 369

  Fly   341 ASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLW----------------YDQIIVES 389
            ..|..:||.|..|||||..:.||||||||||:|.|||.|::                :.::|.:.
 Frog   370 VKKRAIVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHIFTSDGLHAEVTGVGYNRFGEVIHDG 434

  Fly   390 DTTESFRGSHFKIEDKSFNALFMCAALCNSAEFKGGQDDIPVFKKDVNGNASEAALLKFTETIFA 454
            :....|.       :.|.:.:.....:||.||.:         ...:.|..:|.||:..:..:  
 Frog   435 EIIHGFC-------NPSISKVIEAGCVCNDAEIR---------NNTLMGKPTEGALIALSMKM-- 481

  Fly   455 GIGAFRQKHIKLTEIPFNSTEKYQV--SVHEFNSSDGYFIVEMKGAPERILDRCSTIIIQGLSVE 517
            |:.|.|..:|:..|.||:|.:|:..  .||. ...|...|..||||.|:::..|:|...:|.:..
 Frog   482 GLEALRHDYIRRAEYPFSSEQKWMAVKCVHR-TQQDKPEICFMKGAYEQVIKYCTTYNSKGQTFP 545

  Fly   518 LTPTLKLEFEEAYLE----MGGMGERVLGFADLLLPMSKYPISYEFSADPPNFPLENLRFLGLIS 578
            ||.    :..|.||:    ||..|.||:..|                :.|   .|..|.||||:.
 Frog   546 LTQ----QQRELYLQETAYMGTAGLRVIALA----------------SGP---ELGQLTFLGLVG 587

  Fly   579 LIDPPRAAVPDAVAKCRSAGVRVIMVTGDHPITAKAIARSVGIITTPTAEDIAKQRGVTVLDIDS 643
            :|||||..|.:||:....:||.:.|:|||...||.|||..:|..:          :|:..|.   
 Frog   588 MIDPPRTGVKEAVSTLIRSGVAIKMITGDSQETAVAIASRLGFYS----------KGLQSLS--- 639

  Fly   644 RQATAIVVHGGELREMKAEELDAVIYYHNEIVFARTSPQQKLIIVEACQRRGEIVAVTGDGVNDS 708
                     |.::..|..::|..::  ....||.|.||:.||.||::.|..|.:||:|||||||:
 Frog   640 ---------GEDVDMMDIQQLSQMV--SKVSVFYRASPRHKLKIVKSLQNIGAVVAMTGDGVNDA 693

  Fly   709 PALKRADIGVAMGISGSDVSKQAADMILLDDNFASIVVGIEEGRIIFDNLKKSIAYTLTSNLPEI 773
            .|||.||||:|||.:|:||.|:||||||::|:|.:|:..||||:.|::|:|..:.:.|::::..:
 Frog   694 VALKAADIGIAMGKTGTDVCKEAADMILVEDDFQTIMSAIEEGKGIYNNIKNFVRFQLSTSIAAL 758

  Fly   774 VPFLFFVIFDIPLALGTIAILCIDIGTDMLPAISLAYEKAESDIMARMPRDPFEDRLVNKKLILM 838
            .......:.:.|..|..:.||.|:|..|..||.||..|..:.|::.:.||: .:|.::.|.||:.
 Frog   759 TLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRN-LKDSILTKNLIVK 822

  Fly   839 AYLQIGVIQTVACFFTFFAIMAEHGFPPSRLKGIREDWDSKNVEDLEDGYGQEWTYRERKVLEYT 903
            ..|. .:|......|.|:..:.::...|                            |:.      
 Frog   823 ILLS-SIIIVCGTLFVFWRELRDNLITP----------------------------RDT------ 852

  Fly   904 AGTGFFVSIVVTQVFDLLICKTRRNSILQQGM-GNHVLNFALVLEFIIACLLCYVPVFEKTLRMY 967
              |..|...|...:|:.|..:::..|:.:.|: .|.:..:|::...:...|:.|.|..:|..:..
 Frog   853 --TMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTE 915

  Fly   968 SI 969
            |:
 Frog   916 SL 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JYalphaNP_001104092.2 ATPase-IIC_X-K 17..1009 CDD:273445 281/977 (29%)
Cation_ATPase_N 29..102 CDD:214842 18/72 (25%)
E1-E2_ATPase 123..354 CDD:278548 71/235 (30%)
Cation_ATPase 416..509 CDD:289987 27/94 (29%)
COG4087 <673..738 CDD:226572 40/64 (63%)
Cation_ATPase_C 785..994 CDD:279079 39/186 (21%)
atp2c1XP_002937789.2 P-type_ATPase_SPCA 98..940 CDD:319779 268/938 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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