DRSC/TRiP Functional Genomics Resources

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Protein Alignment JYalpha and atp2b4

DIOPT Version :9

Sequence 1:NP_001104092.2 Gene:JYalpha / 5740846 FlyBaseID:FBgn0267363 Length:1009 Species:Drosophila melanogaster
Sequence 2:XP_002934276.2 Gene:atp2b4 / 100487776 XenbaseID:XB-GENE-960658 Length:1257 Species:Xenopus tropicalis


Alignment Length:1000 Identity:279/1000 - (27%)
Similarity:429/1000 - (42%) Gaps:258/1000 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DELLERLKTDPNMGLSFVEAKL--RLEINGPNILTPQPPTPKWIVFLKTMFGGFAILLWAG---- 96
            |.|..||||.|..||....|.|  |.:..|.|.:.|:.|        ||    |..|:|..    
 Frog    54 DGLCRRLKTSPTEGLPGTAADLEKRRQTFGQNFIPPKKP--------KT----FLQLVWEALQDV 106

  Fly    97 -SFLCFVGYLIQLQTQ-HEPP--------------------DDNLYLGIALTVLVIVTGLFTYFQ 139
             ..:..:..:|.|... :.||                    :.....|.|:.:.|:...|.|.|.
 Frog   107 TLIILEIAAIISLGLSFYRPPGGETEGCGGAAAGAEDEGEAEAGWIEGAAILLSVVCVVLVTAFN 171

  Fly   140 VHKSSSIMDSFKNLVPQYA--TVIREGEINTVTSDEIVKGDIVEVKFGDRVPADIRILEAHGLKV 202
            ...........::.:.|..  ||:|..::..:...|:|.|||.:||:||.:|.|...::.:.||:
 Frog   172 DWSKEKQFRGLQSRIEQEQKFTVVRGSQVIQIPVAEMVVGDIAQVKYGDLLPTDGIFIQGNDLKI 236

  Fly   203 DNSSLTGESEPQVRSTEFTHENPLETKNLAFFSTNVLEGTCRGVVIATGDSTVMGRIANL----- 262
            |.|||||||: |||.:       ::...:....|:|:||:.|.:|.|.|.::..|.|..|     
 Frog   237 DESSLTGESD-QVRKS-------VDKDPMLLSGTHVMEGSGRMLVTAVGVNSQTGIIFTLLGASE 293

  Fly   263 ------------------------------------AAG--------------------LDDVQ- 270
                                                |||                    ::.:| 
 Frog   294 AEDEKKDKKGVKKEEGPQLQVGSTHPPSHPPAATDGAAGANAIDNANASLVNGKMQDGNVESIQN 358

  Fly   271 --------------------------------SPISREIQLFIRFITIFAIILG-----LSFFAI 298
                                            :|..:|..:....:|..|:.:|     :|...:
 Frog   359 KAKQQDGAAAMEMQPLKSAEGGDGDDKDKKKSNPHKKEKSVLQGKLTKLAVQIGKAGLVMSAITV 423

  Fly   299 SLTLGYEFIDAVV---------------------FLIG--IIVANVPEGLLVTVTVCLTLTAKRM 340
            .:.:.|..||..|                     |:||  ::|..|||||.:.||:.|..:.|:|
 Frog   424 IILVLYFAIDTFVVNKRQWLPECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKM 488

  Fly   341 ASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWYDQIIVESDTTESFRGS-HFK-IE 403
            ...|.||::|:|.||:|:.:.||||||||||.|||||              .::|.|. |:| |.
 Frog   489 MKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTV--------------VQAFVGDVHYKEIP 539

  Fly   404 D------KSFNALFMCAALCNS--------AEFKGGQDDIPVFKKDVNGNASEAALLKFTETIFA 454
            |      |:.:.|....|: ||        ||..||   :|   :.| ||.:|..||.|...:..
 Frog   540 DPDGLPAKTLDVLVHAIAI-NSAYTSKVLPAEKDGG---LP---RQV-GNKTECGLLGFVLDLKR 596

  Fly   455 GIGAFRQK--HIKLTEI-PFNSTEKYQVSVHEFNSSDGYFIVEMKGAPERILDRCS-TIIIQGLS 515
            .....|.|  ..||.:: .|||..|...:|.:.  .||.:.:..|||.|.:|.:|| |:...|..
 Frog   597 DYQVVRNKIPEEKLYKVYTFNSVRKSMSTVVKL--EDGSYRMYSKGASEIVLKKCSRTLNEAGEP 659

  Fly   516 VELTPTLKLEFEEAYLE-MGGMGERVLGFADLLLPMSKYPISYEFSADPPNFPLENLRFLGLISL 579
            ....|..:.:..:..:| |...|.|.:..|....|||..|     ..|..|..:.:|..|.::.:
 Frog   660 RIFRPRDRDDMVKNVIEPMACDGLRTICIAYRDFPMSPEP-----DWDNENDIVTDLTCLAVVGI 719

  Fly   580 IDPPRAAVPDAVAKCRSAGVRVIMVTGDHPITAKAIARSVGIITTPTAEDIAKQRGVTVLDIDSR 644
            .||.|..||:|:.||:.||:.|.|||||:..||:|||...|||          ..|...|.|:.:
 Frog   720 EDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAIKCGII----------HPGEDFLCIEGK 774

  Fly   645 QATAIVVHGGELREMKAEELDAVIYYHNEIVFARTSPQQK--LI--IVEACQ-RRGEIVAVTGDG 704
            :....:  ..|..|::.|.:|.:  :....|.||:||..|  |:  |:::.| .:.::|||||||
 Frog   775 EFNRRI--RNEKGEIEQERIDKI--WPKLRVLARSSPTDKHTLVKGIIDSTQVEQRQVVAVTGDG 835

  Fly   705 VNDSPALKRADIGVAMGISGSDVSKQAADMILLDDNFASIVVGIEEGRIIFDNLKKSIAYTLTSN 769
            .||.||||:||:|.||||:|:||:|:|:|:||.||||.|||..:..||.::|::.|.:.:.||.|
 Frog   836 TNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVN 900

  Fly   770 LPEIVPFLFFVIF-------DIPLALGTIAILCIDIGTDMLPAISLAYEKAESDIMARMP---RD 824
            :..::     |.|       |.||.  .:.:|.:::..|...:::||.|.....::.|.|   ..
 Frog   901 VVAVI-----VAFTGACITQDSPLK--AVQMLWVNLIMDTFASLALATEPPTESLLLRKPYGRNK 958

  Fly   825 PFEDRLVNKKLILMAYLQIGVIQTV 849
            |...|.:.|.::..|..|:.:|.|:
 Frog   959 PLISRTMMKNILGHAVYQLTLIFTL 983

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JYalphaNP_001104092.2 ATPase-IIC_X-K 17..1009 CDD:273445 279/999 (28%)
Cation_ATPase_N 29..102 CDD:214842 21/70 (30%)
E1-E2_ATPase 123..354 CDD:278548 77/354 (22%)
Cation_ATPase 416..509 CDD:289987 32/104 (31%)
COG4087 <673..738 CDD:226572 37/69 (54%)
Cation_ATPase_C 785..994 CDD:279079 16/67 (24%)
atp2b4XP_002934276.2 ATPase-IIB_Ca 12..1101 CDD:273668 279/999 (28%)
ATP_Ca_trans_C 1140..1186 CDD:403580
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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