DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and Kcnk9

DIOPT Version :10

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_445857.2 Gene:Kcnk9 / 84429 RGDID:621451 Length:396 Species:Rattus norvegicus


Alignment Length:349 Identity:64/349 - (18%)
Similarity:110/349 - (31%) Gaps:108/349 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 QPHEAFFYVELVCNVWFFIEVIIRL---IVSPN---------LWQFIKSPVNIIDFTATLSFYTD 364
            :||.|....:...:.:|.|.||..:   ..:|.         .:..:..|:.::.|         
  Rat    70 EPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMF--------- 125

  Fly   365 VMQRMGEYTGLLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLA 429
              |.:||.......:.:.||.:..       |:|    ..:.|.:.:..:.||..:|.:...:.|
  Rat   126 --QSLGERMNTFVRYLLKRIKKCC-------GMR----NTEVSMENMVTVGFFSCMGTLCLGAAA 177

  Fly   430 YYAEKLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPG-------------MFVGALCAL 481
            :  .:.:|      .|.....::..:|:||:|:||.......|             |::     |
  Rat   178 F--SQCED------WSFFHAYYYCFITLTTIGFGDFVALQSKGALQRKPFYVAFSFMYI-----L 229

  Fly   482 AGVLTIALPVPVIVSNFSMFYSHTQ------ARSKLPKKRRRVLPVEQPRRKREPTAPHR--GRT 538
            .|:..|...:.::|..|....:...      |:......||.|:.|.|.|::..|....|  |||
  Rat   230 VGLTVIGAFLNLVVLRFLTMNTDEDLLEGEVAQILAGNPRRVVVRVPQSRKRHHPMYFLRKYGRT 294

  Fly   539 -----------------------NAIKQTP-PTGPGLVAGGVVPVGAGGPGLGG-----HAVGHS 574
                                   |.:..|| |......|....|    ||....     |:|...
  Rat   295 LCYLCFPGANWGDDDDDDDDAVENVVVTTPVPPAVAAAAAAATP----GPSTRNVRATVHSVSCR 355

  Fly   575 AAGAP-------MFKDAFGGAKIG 591
            ....|       .|:..||....|
  Rat   356 VEEIPPDVLRNTYFRSPFGAIPPG 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB_Shaw-like 4..115 CDD:349723
Ion_trans 307..506 CDD:459842 37/218 (17%)
Kcnk9NP_445857.2 Ion_trans_2 <73..132 CDD:462301 11/69 (16%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:Q9NPC2 93..98 0/4 (0%)
Ion_trans_2 <184..243 CDD:462301 12/63 (19%)
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:Q9NPC2 199..204 2/4 (50%)
X-gate. /evidence=ECO:0000250|UniProtKB:Q9NPC2 243..248 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.

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