DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and si:ch73-334d15.4

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:XP_001336524.4 Gene:si:ch73-334d15.4 / 796217 ZFINID:ZDB-GENE-091204-184 Length:430 Species:Danio rerio


Alignment Length:522 Identity:168/522 - (32%)
Similarity:248/522 - (47%) Gaps:130/522 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVLNEYFFDRHPGVFTQILNYYRTGKLH 70
            :|:|||.|:::||.:.||..:|.:||:.    |.|.:...:|.||||||.||..:|.|||:||||
Zfish    18 KIVLNVGGVKHETLRTTLMSLPGSRLAE----LVNTEKSPSELFFDRHPEVFAHVLQYYRSGKLH 78

  Fly    71 YPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLA-----ILDKLDIENEKPTEEQI 130
            .|:::||.|.|||..|||:.|..||||||.|:..:::|...||     ::.|   |.|...::| 
Zfish    79 CPSNLCGLLLEEEFTFWGISSADVEPCCWETFQQNKETLKALAGIKPSVMKK---EEESGQKQQ- 139

  Fly   131 ARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKTHPGFR 195
                   .:.|.|    |||   ||||:||:|.||..|:|:|.:|:|||.:|:|:|.|.|.|.. 
Zfish   140 -------SSSSRG----WQR---KIWALFDKPYSSVCARIIAIISLFFILLSIIAFSLWTLPSI- 189

  Fly   196 VDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSYSSGNFTA 260
                                         .:||:                 :..:.|.|:.:|:.
Zfish   190 -----------------------------NSHQF-----------------LNAWASNSTDDFSR 208

  Fly   261 SGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHE--AFFYVELV 323
            :                                                  :|.|  |...||:|
Zfish   209 T--------------------------------------------------RPPEAQALDAVEIV 223

  Fly   324 CNVWFFIEVIIRLIVSPN-LWQFIKSPVNIIDFTATLS-FYTDVMQRMGEYT-GLLEAFSIVRIM 385
            |::||..|..||....|: ||.|| :.:||:|..|... |:.........:. |.|.|...:|::
Zfish   224 CSIWFVFEFAIRAGSCPSKLWFFI-NVMNIVDLLALFPWFFRWSSNNFSVFALGFLHAMRCIRLL 287

  Fly   386 RLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQDNPDNQFKSIPLGL 450
            |:|||.:|..|:|:|.||.:||...|.::...|.:..:.|.::.|:||....:......|...|.
Zfish   288 RVFKLMQHVFGVRVLTHTLRASLTSLCIVPLLLSICTLIFGTMFYFAELTHKDSYISSSSGLDGF 352

  Fly   451 WWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFYSHTQARSKLPKKR 515
            |||:||:|||||||:.|.|..|..|..|||:.|||.|.||||:||:||..|.|..:.:..:|:..
Zfish   353 WWALVTLTTVGYGDMLPVTRQGKCVAFLCAMVGVLLIVLPVPIIVNNFLKFSSLVKTKHSMPRMN 417

  Fly   516 RR 517
            .:
Zfish   418 EK 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 46/91 (51%)
BTB_2 7..97 CDD:280393 44/89 (49%)
Ion_trans 307..506 CDD:278921 79/203 (39%)
Ion_trans_2 <449..499 CDD:285168 31/49 (63%)
si:ch73-334d15.4XP_001336524.4 BTB 19..107 CDD:197585 46/91 (51%)
BTB_2 19..105 CDD:280393 44/89 (49%)
Ion_trans 217..400 CDD:278921 72/183 (39%)
Ion_trans_2 319..402 CDD:285168 38/82 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11537
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.000

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