DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawl and Kcng4

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_080010.2 Gene:Kcng4 / 66733 MGIID:1913983 Length:506 Species:Mus musculus


Alignment Length:586 Identity:149/586 - (25%)
Similarity:224/586 - (38%) Gaps:169/586 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IILNVSGIRYETYKATLKKIPATRLSRL---------TEALANYDPVLNEYFFDRHPGVFTQILN 62
            |::||.|.||....:||...|.:|||||         |:...:||....|:||||:|..|..|::
Mouse    60 ILVNVGGQRYLLPWSTLDAFPLSRLSRLRLCRSHEEITQLCDDYDEDSQEFFFDRNPSAFGVIVS 124

  Fly    63 YYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKPTE 127
            :...|||....::|...|.|||.:||::...:|.||            ...:|.||:...|...|
Mouse   125 FLAAGKLVLLREMCALSFREELSYWGIEETNLERCC------------LRKLLKKLEEAAELRRE 177

  Fly   128 EQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKTHP 192
            |...|....:...|..:.:.|.|...::..|.::|.|....|:.|.:||.|:..:.:|.|:.|.|
Mouse   178 EAAQRQQQRQACHSEVQASRWARSMNQLREMVEDPQSGLPGKVFACLSVLFVATTAVSLCVSTMP 242

  Fly   193 GFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSYSSGN 257
            .||.:                                                            
Mouse   243 DFRAE------------------------------------------------------------ 247

  Fly   258 FTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFFYVEL 322
             ...|:.|                                    ||..:|          |.||.
Mouse   248 -EGKGECT------------------------------------RKCYYI----------FVVES 265

  Fly   323 VCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDV------------------MQRM 369
            :|..||.:|..:|.:.:||..||.:.|:|:||..|...:|..:                  ::::
Mouse   266 ICVAWFSLEFCLRFVQAPNKCQFFRGPLNVIDILAISPYYVSLAVSDESPEAGERPSSSSYLEKV 330

  Fly   370 GEYTGLLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEK 434
            |....:|.|..|:.:||   |.|||.||:.|..|.:..|:|..||:.||.:.:..|:.|.|.||.
Mouse   331 GLVLRVLRALRILYVMR---LARHSLGLQTLGLTVRRCAREFGLLMLFLAVAVTLFSPLVYVAEN 392

  Fly   435 LQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFS 499
             :.....:|.|||...||||::||||||||:.|::.||..|.....|:|:|.:|.|...|...||
Mouse   393 -ESGRVLEFTSIPASYWWAIISMTTVGYGDMVPRSVPGQMVALSSILSGILIMAFPATSIFHTFS 456

  Fly   500 MFYSHTQARSKLPKKRRRVLPVEQPRRKREPTAPHRGRTNAIKQTPPTGPGLVAGGVVPVGAGGP 564
            ..|...:...:..:.|.|.|.......:||..:.                   ...:||.|...|
Mouse   457 HSYLELKREQEQVQARLRRLQNTNSASERELLSD-------------------VDDLVPEGLTSP 502

  Fly   565 G 565
            |
Mouse   503 G 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 37/100 (37%)
BTB_2 7..97 CDD:280393 36/98 (37%)
Ion_trans 307..506 CDD:278921 73/216 (34%)
Ion_trans_2 <449..499 CDD:285168 22/49 (45%)
Kcng4NP_080010.2 BTB_POZ 58..167 CDD:365784 39/118 (33%)
Ion_trans 219..463 CDD:366146 88/354 (25%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 416..421 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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