DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and Kcnv1

DIOPT Version :10

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_067729.1 Gene:Kcnv1 / 60326 RGDID:621264 Length:503 Species:Rattus norvegicus


Alignment Length:541 Identity:138/541 - (25%)
Similarity:217/541 - (40%) Gaps:165/541 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IILNVSGIRYETYKATLKKIPATRLSRLTEALANY-------------------DPVLNEYFFDR 52
            :.:||.|.|:...:..|...|.|||.:|...:|:|                   :||.|||||||
  Rat    44 LTVNVGGSRFVLSQQALSCFPHTRLGKLAVVVASYRRLGALAAAPSPLELCDDANPVDNEYFFDR 108

  Fly    53 HPGVFTQILNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDK 117
            ....|..:|:|||||:||....:|...|.:|:::||:|...::.||...|...::...||..  |
  Rat   109 SSQAFRYVLHYYRTGRLHVMEQLCALSFLQEIQYWGIDELSIDSCCRDRYFRRKELSETLDF--K 171

  Fly   118 LDIENEKPTEEQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVS 182
            .|.::::...|.       |:..|.|.  | ..::.|:|.:.::|.|||.|:|...:|:.|:.||
  Rat   172 KDTDDQESQHES-------EQDFSQGP--C-PTVRQKLWDILEKPGSSTAARIFGVISIIFVAVS 226

  Fly   183 VISFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRV 247
            :::..|.:                                                         
  Rat   227 IVNMALMS--------------------------------------------------------- 234

  Fly   248 TNYTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQ 312
                                                                  .:..|:..   
  Rat   235 ------------------------------------------------------AELSWLNL--- 242

  Fly   313 PHEAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFY-------------TD 364
              :....:|.||..||..|.|:|.:...:...|::...||||..|.|.||             |.
  Rat   243 --QLLEILEYVCISWFTGEFILRFLCVKDRCHFLRKVPNIIDLLAILPFYITLLVESLSGSHTTQ 305

  Fly   365 VMQRMGEYTGLLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLA 429
            .::.:|.   |::...::|.:|:.||.|||.|||.|..|.....:|:.||:.||.:||..|:::.
  Rat   306 ELENVGR---LVQVLRLLRALRMLKLGRHSTGLRSLGMTITQCYEEVGLLLLFLSVGISIFSTIE 367

  Fly   430 YYAEKLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVI 494
            |:||  |..||..|.|:|...|||..:||||||||:.|.|..|..|..:|.|:|:|.:|||:.:|
  Rat   368 YFAE--QSIPDTTFTSVPCAWWWATTSMTTVGYGDIRPDTTTGKIVAFMCILSGILVLALPIAII 430

  Fly   495 VSNFSMFYSHTQARSKLPKKR 515
            ...||..|...:.:....::|
  Rat   431 NDRFSACYFTLKLKEAAVRQR 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB_Shaw-like 4..115 CDD:349723 41/126 (33%)
Ion_trans 307..506 CDD:459842 75/211 (36%)
Kcnv1NP_067729.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
BTB_POZ 44..163 CDD:453885 39/118 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..192 6/29 (21%)
Ion_trans 212..438 CDD:459842 82/346 (24%)
Selectivity filter. /evidence=ECO:0000250 395..400 4/4 (100%)
Blue background indicates that the domain is not in the aligned region.

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