DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawl and kcnv2a

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:XP_695650.4 Gene:kcnv2a / 567267 ZFINID:ZDB-GENE-091117-27 Length:518 Species:Danio rerio


Alignment Length:530 Identity:135/530 - (25%)
Similarity:212/530 - (40%) Gaps:155/530 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LNVSGIRYETYKATLKKIPATRLSRLT---------EALANYDPVLNEYFFDRHPGVFTQILNYY 64
            :||.|..|:.......|.|.||:.||.         :...:|....||:||||.|.||..|.|:|
Zfish    86 INVGGKVYQISYRVAAKYPKTRIGRLATYTDHNRKLDLCDDYTVHNNEFFFDRDPDVFHNIFNFY 150

  Fly    65 RTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQN-TLAILDKLDIENEKPTEE 128
            |||.|....::|...|.||:.:||:.......||..::...:|..| .|.:..:|:.|.|....|
Zfish   151 RTGVLWIKDELCPRNFLEEINYWGVRIKNTHRCCRISFEERQDELNEQLKVQRELEAEVETEEHE 215

  Fly   129 QIAR--LFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKTH 191
            .:.:  .||....|              ||.|.::|.||..|||:|..|.||:.||:::..|.| 
Zfish   216 DLFQDMAFGHTRFL--------------IWNMMEKPFSSIIAKIMAVASSFFVLVSLVAMTLNT- 265

  Fly   192 PGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSYSSG 256
                                            .:..||                           
Zfish   266 --------------------------------VEEMQY--------------------------- 271

  Fly   257 NFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFFYVE 321
             .|.:||                  ::|                       :||.:      |||
Zfish   272 -ITTNGQ------------------LSG-----------------------KTYCE------YVE 288

  Fly   322 LVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFY-------------------TDVMQ 367
            ..|..:|.:|.::||:.:|:|.:|.:|.:|.:|..|.|..|                   .:.:.
Zfish   289 TFCIAFFTMEYLLRLVSTPDLTRFGRSVLNAVDLIAILPLYLQMVLESFESHDYWKHGSDIETVG 353

  Fly   368 RMGEYTGLLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYA 432
            |:|:...:|....::||.|:.||.|||.|||....|.:...:::..|..|:.:||:.|:::.|..
Zfish   354 RVGKLGQVLRIMRLMRIFRILKLARHSTGLRAFGFTLRQCYQQVGCLFLFIAMGILTFSAMVYTV 418

  Fly   433 EKLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSN 497
            |  .|.....|.|||...|||.|:::||||||:.|:|:.|......|...|::...:|:.::.:.
Zfish   419 E--HDVHKTNFTSIPHAWWWAAVSISTVGYGDMFPETHLGRIFAFACISFGIILNGMPISILFNK 481

  Fly   498 FSMFYSHTQA 507
            ||.:||..:|
Zfish   482 FSDYYSKLKA 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 34/98 (35%)
BTB_2 7..97 CDD:280393 33/96 (34%)
Ion_trans 307..506 CDD:278921 66/217 (30%)
Ion_trans_2 <449..499 CDD:285168 16/49 (33%)
kcnv2aXP_695650.4 BTB 84..175 CDD:295341 32/88 (36%)
BTB 86..175 CDD:197585 32/88 (36%)
Ion_trans 285..490 CDD:278921 64/212 (30%)
Ion_trans_2 403..484 CDD:285168 28/82 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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