DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and kcnk10b

DIOPT Version :10

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:XP_005169840.1 Gene:kcnk10b / 565629 ZFINID:ZDB-GENE-050420-31 Length:575 Species:Danio rerio


Alignment Length:120 Identity:27/120 - (22%)
Similarity:41/120 - (34%) Gaps:48/120 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   413 LLVFFLVLGIVFFASLAYY------------------AEKLQDNP-------------------- 439
            |.||.:||..:....||:.                  |:.||.||                    
Zfish    98 LAVFVVVLSYLVCGGLAFQALEQPFESIQKDSITQKKAQFLQKNPCVSHADLEALIKHAVEAVST 162

  Fly   440 ------DNQFKS----IPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGV 484
                  |..:.|    :....::|...:||:|||::||.|..|.....|.|:.|:
Zfish   163 GVSPIGDASYNSSQWDLGSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGI 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB_Shaw-like 4..115 CDD:349723
Ion_trans 307..506 CDD:459842 27/120 (23%)
kcnk10bXP_005169840.1 Ion_trans_2 165..231 CDD:462301 15/53 (28%)
Ion_trans_2 263..350 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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