DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and KCNQ5

DIOPT Version :10

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_001153605.1 Gene:KCNQ5 / 56479 HGNCID:6299 Length:951 Species:Homo sapiens


Alignment Length:282 Identity:72/282 - (25%)
Similarity:116/282 - (41%) Gaps:55/282 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 QRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFFY--------------------- 319
            |..:||:....:..::...:     .|..||...|    .||.:                     
Human   100 QSCRRNVKYRRVQNYLYNVL-----ERPRGWAFIY----HAFVFLLVFGCLILSVFSTIPEHTKL 155

  Fly   320 -------VELVCNVWFFIEVIIRLIVSPNL------WQ----FIKSPVNIID---FTATLSFYTD 364
                   :|.|..|.|.:|.||| |.|...      ||    |.:.|..:||   ..|:::..:.
Human   156 ASSCLLILEFVMIVVFGLEFIIR-IWSAGCCCRYRGWQGRLRFARKPFCVIDTIVLIASIAVVSA 219

  Fly   365 VMQRMGEYTGLLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLA 429
            ..|.....|..|.:...::|:|:.::.|.....::|.....|.:|||....:...|.::|.:.|.
Human   220 KTQGNIFATSALRSLRFLQILRMVRMDRRGGTWKLLGSVVYAHSKELITAWYIGFLVLIFSSFLV 284

  Fly   430 YYAEKLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVI 494
            |..||   :.:.:|.:....|||..:|:||:||||..|.|:.|..:.|..||.|:...|||..::
Human   285 YLVEK---DANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSAGFALLGISFFALPAGIL 346

  Fly   495 VSNFSMFYSHTQARSKLPKKRR 516
            .|.|::.... |.|.|..:|||
Human   347 GSGFALKVQE-QHRQKHFEKRR 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB_Shaw-like 4..115 CDD:349723
Ion_trans 307..506 CDD:459842 60/239 (25%)
KCNQ5NP_001153605.1 Ion_trans 126..358 CDD:459842 60/240 (25%)
Interaction with CALM. /evidence=ECO:0000269|PubMed:29429937 370..378
KCNQ_channel 466..653 CDD:460954
Interaction with CALM. /evidence=ECO:0000269|PubMed:29429937 540..547
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 674..697
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 895..938
Blue background indicates that the domain is not in the aligned region.

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