DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and KCNS1

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:XP_016883335.1 Gene:KCNS1 / 3787 HGNCID:6300 Length:527 Species:Homo sapiens


Alignment Length:520 Identity:143/520 - (27%)
Similarity:221/520 - (42%) Gaps:125/520 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LNVSGIRYETYKATLKKIPATRLSRLTEALA---------NYDPVLNEYFFDRHPGVFTQILNYY 64
            :||.|:|.:.....|.:.|.|||.||..|.:         :||....|::||||||.|..:|::|
Human    55 VNVGGVRRQLSARALARFPGTRLGRLQAAASEEQARRLCDDYDEAAREFYFDRHPGFFLSLLHFY 119

  Fly    65 RTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKPTEEQ 129
            |||.||...::|...|.:|.::|||..|.:..||.:.|...|.||......|.....:..|..::
Human   120 RTGHLHVLDELCVFAFGQEADYWGLGENALAACCRARYLERRLTQPHAWDEDSDTPSSVDPCPDE 184

  Fly   130 IARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKTHPGF 194
            |:.:  ..|....|...| .|::.::|...:.|..|..:|:.:.:|:..:..|:.:.|:.:.|.:
Human   185 ISDV--QRELARYGAARC-GRLRRRLWLTMENPGYSLPSKLFSCVSISVVLASIAAMCIHSLPEY 246

  Fly   195 RVDLPSGAHDAHGPGAGGPPHG--HDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSYSSGN 257
            :....:.|..|  ..||..|.|  .||:                                     
Human   247 QAREAAAAVAA--VAAGRSPEGVRDDPV------------------------------------- 272

  Fly   258 FTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFFYVEL 322
                                |:|                                       :|.
Human   273 --------------------LRR---------------------------------------LEY 278

  Fly   323 VCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVM----------QRMGEYTGLLE 377
            .|..||..||..||:::|:...|...|:|:||..:.|.||..::          :..|....:::
Human   279 FCIAWFSFEVSSRLLLAPSTRNFFCHPLNLIDIVSVLPFYLTLLAGVALGDQGGKEFGHLGKVVQ 343

  Fly   378 AFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQDNPDNQ 442
            .|.::||.|:.||.|||.|||.|..|.|.|.:|:.:|:.:|.:|:..|:.:||.|||   ..|..
Human   344 VFRLMRIFRVLKLARHSTGLRSLGATLKHSYREVGILLLYLAVGVSVFSGVAYTAEK---EEDVG 405

  Fly   443 FKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFYSHTQA 507
            |.:||...||..|:|||||||||.|.|..|....:.|.|.|:|.:|||:.:|.:.||.||...:|
Human   406 FNTIPACWWWGTVSMTTVGYGDVVPVTVAGKLAASGCILGGILVVALPITIIFNKFSHFYRRQKA 470

  Fly   508  507
            Human   471  470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 37/98 (38%)
BTB_2 7..97 CDD:280393 36/96 (38%)
Ion_trans 307..506 CDD:278921 75/208 (36%)
Ion_trans_2 <449..499 CDD:285168 23/49 (47%)
KCNS1XP_016883335.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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