DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawl and KCNG1

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_002228.2 Gene:KCNG1 / 3755 HGNCID:6248 Length:513 Species:Homo sapiens


Alignment Length:557 Identity:151/557 - (27%)
Similarity:235/557 - (42%) Gaps:177/557 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DGENRIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVL----------NEYFFDRHPGV 56
            |...|||:||.||:|.....||.:.|.|||.:| :|..|:|.:|          ||:||||:||.
Human    60 DRRRRIIINVGGIKYSLPWTTLDEFPLTRLGQL-KACTNFDDILNVCDDYDVTCNEFFFDRNPGA 123

  Fly    57 FTQILNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTY---------SIHRDTQNTL 112
            |..||.:.|.|||....::|...|:|||.:||:..:.::.||...|         .:.|:.::  
Human   124 FGTILTFLRAGKLRLLREMCALSFQEELLYWGIAEDHLDGCCKRRYLQKIEEFAEMVEREEED-- 186

  Fly   113 AILDKLDIE---NEKPTEEQIARLFGFEEALSNGEL-NCWQRIKPKIWAMFDEPSSSTGAKIVAG 173
               |.||.|   :|.|.|             ..|.| .|.:|::.    |.:.|.|....|:.|.
Human   187 ---DALDSEGRDSEGPAE-------------GEGRLGRCMRRLRD----MVERPHSGLPGKVFAC 231

  Fly   174 MSVFFIFVSVISFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPS 238
            :||.|:.|:.::..:.|.|..|                                           
Human   232 LSVLFVTVTAVNLSVSTLPSLR------------------------------------------- 253

  Fly   239 GSIGPTFRVTNYTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRK 303
                                                                 ||:..||..:..
Human   254 -----------------------------------------------------EEEEQGHCSQMC 265

  Fly   304 HGWIETYGQPHEAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVM-- 366
            |.           .|.||.||..||.:|.::|||.:|:.:.|::||:.:||..|.|.:|..::  
Human   266 HN-----------VFIVESVCVGWFSLEFLLRLIQAPSKFAFLRSPLTLIDLVAILPYYITLLVD 319

  Fly   367 ------QRMGEYTGLLEAFSIV-------RIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFL 418
                  ::.|.....|:...:|       ||:.:.:|.|||.||:.|..|.:...:|..||:.||
Human   320 GAAAGRRKPGAGNSYLDKVGLVLRVLRALRILYVMRLARHSLGLQTLGLTARRCTREFGLLLLFL 384

  Fly   419 VLGIVFFASLAYYAE-KLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALA 482
            .:.|..||.|.|..| ::.|:|  :|.|||...|||::|||||||||:.|::.||..|.....|:
Human   385 CVAIALFAPLLYVIENEMADSP--EFTSIPACYWWAVITMTTVGYGDMVPRSTPGQVVALSSILS 447

  Fly   483 GVLTIALPVPVIVSNFSMFYSHTQARSKLPKKRRRVL 519
            |:|.:|.||.      |:|::.:::..:|.:::.||:
Human   448 GILLMAFPVT------SIFHTFSRSYLELKQEQERVM 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 41/101 (41%)
BTB_2 7..97 CDD:280393 40/99 (40%)
Ion_trans 307..506 CDD:278921 74/214 (35%)
Ion_trans_2 <449..499 CDD:285168 22/49 (45%)
KCNG1NP_002228.2 BTB_POZ_KCNG1_2 60..173 CDD:349728 45/113 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..204 7/37 (19%)
Ion_trans 227..471 CDD:395416 88/358 (25%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 424..429 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.