DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and KCNF1

DIOPT Version :10

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_002227.2 Gene:KCNF1 / 3754 HGNCID:6246 Length:494 Species:Homo sapiens


Alignment Length:619 Identity:171/619 - (27%)
Similarity:244/619 - (39%) Gaps:203/619 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IILNVSGIRYETYKATLKKIPATRLSRLTEALA-----------NYDPVLNEYFFDRHPGVFTQI 60
            |::||.|:|...|...|.:.|.|||:.|...||           :|||...|::|||.|..|..:
Human    25 IVVNVGGVRQVLYGDLLSQYPETRLAELINCLAGGYDTIFSLCDDYDPGKREFYFDRDPDAFKCV 89

  Fly    61 LNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLA-----ILDKLDI 120
            :..|..|::|....:|...|:.|::||.:|...::.||.|..|..|:....:|     |||.|.:
Human    90 IEVYYFGEVHMKKGICPICFKNEMDFWKVDLKFLDDCCKSHLSEKREELEEIARRVQLILDDLGV 154

  Fly   121 ENEKPTEEQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVIS 185
            :                  .:.|.   |:|.:..:|...::|.||..|::||.:|...|.||.:.
Human   155 D------------------AAEGR---WRRCQKCVWKFLEKPESSCPARVVAVLSFLLILVSSVV 198

  Fly   186 FCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNY 250
            .|:.|.|..:|      .||.|                                           
Human   199 MCMGTIPELQV------LDAEG------------------------------------------- 214

  Fly   251 TSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHE 315
                                                             .|.:|..:|.      
Human   215 -------------------------------------------------NRVEHPTLEN------ 224

  Fly   316 AFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFY-----TDVMQRMGEYTGL 375
                ||..|..||.:|.::||..|||...|..|.:||:|..|.|.||     |.:..||.|.|.:
Human   225 ----VETACIGWFTLEYLLRLFSSPNKLHFALSFMNIVDVLAILPFYVSLTLTHLGARMMELTNV 285

  Fly   376 ---LEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQD 437
               ::|..|:||.|:|||.|||.||:.|.:..|.|.|||.||:.:|.:||..|::|.|..|  |.
Human   286 QQAVQALRIMRIARIFKLARHSSGLQTLTYALKRSFKELGLLLMYLAVGIFVFSALGYTME--QS 348

  Fly   438 NPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFY 502
            :|:..|||||...||||:|||||||||:.|||..|....|:..|.||:.||||:..|::||..:|
Human   349 HPETLFKSIPQSFWWAIITMTTVGYGDIYPKTTLGKLNAAISFLCGVIAIALPIHPIINNFVRYY 413

  Fly   503 SHTQARSKLPKKRRRVLPVEQPRRKREPTAPH-------------RGRTNA----IKQTPPTGPG 550
            :           ::|||         |..|.|             .|:|..    :...||.   
Human   414 N-----------KQRVL---------ETAAKHELELMELNSSSGGEGKTGGSRSDLDNLPPE--- 455

  Fly   551 LVAGGVVPVGAGGPGLGGH-AVGHSAAGAPMFKD 583
                   |.|...|..... .:.||....|:..:
Human   456 -------PAGKEAPSCSSRLKLSHSDTFIPLLTE 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB_Shaw-like 4..115 CDD:349723 38/123 (31%)
Ion_trans 307..506 CDD:459842 90/206 (44%)
KCNF1NP_002227.2 BTB_POZ_Kv5_KCNF1 23..138 CDD:349690 37/112 (33%)
Ion_trans 181..417 CDD:459842 106/356 (30%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 370..375 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 433..469 7/45 (16%)

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