DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawl and KCNB1

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_004966.1 Gene:KCNB1 / 3745 HGNCID:6231 Length:858 Species:Homo sapiens


Alignment Length:966 Identity:251/966 - (25%)
Similarity:372/966 - (38%) Gaps:293/966 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVL----------NEYFFDRHPGVFTQI 60
            |:.|||.|:.:|....||.::|.|||.:|.:. ..:|.:|          ||||||||||.||.|
Human    32 RVRLNVGGLAHEVLWRTLDRLPRTRLGKLRDC-NTHDSLLEVCDDYSLDDNEYFFDRHPGAFTSI 95

  Fly    61 LNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKP 125
            ||:||||:||...::|...|.:||::||:|...:|.||.:.|...::..|     ::|..|.|..
Human    96 LNFYRTGRLHMMEEMCALSFSQELDYWGIDEIYLESCCQARYHQKKEQMN-----EELKREAETL 155

  Fly   126 TEEQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKT 190
            .|.:       .|...|   .|....:.|:|.:.::|:||..|||:|.:|:.||.:|.|:..|.|
Human   156 RERE-------GEEFDN---TCCAEKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNT 210

  Fly   191 HPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSYSS 255
            .|..:      :.|..|.....|...|                                      
Human   211 LPELQ------SLDEFGQSTDNPQLAH-------------------------------------- 231

  Fly   256 GNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFFYV 320
                                                                            |
Human   232 ----------------------------------------------------------------V 232

  Fly   321 ELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDV--------MQRMGEYTGLLE 377
            |.||..||.:|.::|.:.||..|:|.|.|:|.||..|.|.:|..:        :.:......:::
Human   233 EAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQ 297

  Fly   378 AFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQDNPDNQ 442
            .|.|:||:|:.||.|||.||:.|..|.:.|..||.||:.||.:||:.|:||.::|||  |..|.:
Human   298 IFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEK--DEDDTK 360

  Fly   443 FKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFYSHTQA 507
            |||||...|||.:|||||||||:.|||..|..||.||.:||||.||||:|:||:|||.||.. |.
Human   361 FKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKE-QK 424

  Fly   508 RSKLPKKRRRVLPVEQPRRKREPTAPHRGRTNAIKQTPPTGPGLVAGGVVPVGAGGPGLGGHAVG 572
            |.:...|||..|    .|.||.                        |.:|.:.            
Human   425 RQEKAIKRREAL----ERAKRN------------------------GSIVSMN------------ 449

  Fly   573 HSAAGAPMFKDAFGGAKIGTVNV----NGVNVIGLHPAQRTTTTMAMAMNEADPTPMSALTYQVP 633
                    .|||| ...|..:::    ||.|                 |.:.|..          
Human   450 --------MKDAF-ARSIEMMDIVVEKNGEN-----------------MGKKDKV---------- 478

  Fly   634 MLQPTPTPAHSHGHAHGHAHGLGPASAAMTSSASLTGSAASAAVATAAAAAP-AGPSFISSDYLS 697
                      ...|       |.|.....| ..:|:.:::|.:..|....:| ...|..|..:|:
Human   479 ----------QDNH-------LSPNKWKWT-KRTLSETSSSKSFETKEQGSPEKARSSSSPQHLN 525

  Fly   698 VPAVQSLQPRAATTGHDFML-----PLQPKLLGPLERKDQHPLQLTAHNLASDTHQLMYSGHAHS 757
            |..::.:..:.|.|....:|     ..|.|   |.|..:...:......|.:.|..::   ...|
Human   526 VQQLEDMYNKMAKTQSQPILNTKESAAQSK---PKEELEMESIPSPVAPLPTRTEGVI---DMRS 584

  Fly   758 QHKVGGG-AAVLNVPPTLSMSH---TQMPPGIASMGQRTPNLSFRPAHGASSQVATVQQPIPHSH 818
            ...:... :...:.|.....||   |.:|.  .:.|...|.:.:|.|.|||........|.|.: 
Human   585 MSSIDSFISCATDFPEATRFSHSPLTSLPS--KTGGSTAPEVGWRGALGASGGRFVEANPSPDA- 646

  Fly   819 ACHAS-----------TNCNIKISVASAGLSVGCPDEFRTPKVTLL----DDLSDDVNSSTDDCG 868
            :.|:|           ||..:|:.........|.|    :|.:.:|    |.|.:..:::....|
Human   647 SQHSSFFIESPKSSMKTNNPLKLRALKVNFMEGDP----SPLLPVLGMYHDPLRNRGSAAAAVAG 707

  Fly   869 -DCC-LVD------DSDTYEGTTINNGPSGQENGTE-AIGLDDGL---LDNDGEDE 912
             :|. |:|      :|..|...:....|...|..|. |...:.|:   :|.|.:||
Human   708 LECATLLDKAVLSPESSIYTTASAKTPPRSPEKHTAIAFNFEAGVHQYIDADTDDE 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 44/101 (44%)
BTB_2 7..97 CDD:280393 43/99 (43%)
Ion_trans 307..506 CDD:278921 92/206 (45%)
Ion_trans_2 <449..499 CDD:285168 32/49 (65%)
KCNB1NP_004966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
BTB_POZ_KCNB2 15..141 CDD:349719 47/109 (43%)
Self-association. /evidence=ECO:0000250|UniProtKB:P15387 59..75 3/16 (19%)
Ion_trans 188..424 CDD:395416 108/346 (31%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 377..382 4/4 (100%)
Self-association. /evidence=ECO:0000250|UniProtKB:P15387 448..481 10/90 (11%)
Kv2channel 467..679 CDD:397541 46/265 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 471..524 13/97 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 538..574 7/38 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..807
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 836..858
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.