DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and KCNA10

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_005540.1 Gene:KCNA10 / 3744 HGNCID:6219 Length:511 Species:Homo sapiens


Alignment Length:563 Identity:167/563 - (29%)
Similarity:258/563 - (45%) Gaps:165/563 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DGENRIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVLNEYFFDRHPGVFTQILNYYRT 66
            :|..|:|:|::|:|:||...||.:.|.|.|....:.:..:|.:.|||||||:...|..||.||::
Human    83 EGNQRVIINIAGLRFETQLRTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQS 147

  Fly    67 -GKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKPTEEQI 130
             ||:..|.:|...:|.:|:.|:.|.|..::.        .|:.:..:.     |.|...||.:  
Human   148 GGKIRRPANVPIDIFADEISFYELGSEAMDQ--------FREDEGFIK-----DPETLLPTND-- 197

  Fly   131 ARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKTHPGFR 195
                                |..:.|.:|:.|.||:.|:.||.:||..:.:|:..|||:|.|.||
Human   198 --------------------IHRQFWLLFEYPESSSAARAVAVVSVLVVVISITIFCLETLPEFR 242

  Fly   196 VDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSYSSGNFTA 260
            .|                                                               
Human   243 ED--------------------------------------------------------------- 244

  Fly   261 SGQATPIATIKGGQRQRLK------RNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFFY 319
                           :.||      .|::.::|::.:                  :..|   ||.
Human   245 ---------------RELKVVRDPNLNMSKTVLSQTM------------------FTDP---FFM 273

  Fly   320 VELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVMQRMGEYT----------G 374
            ||..|.|||..|:::|.:|.|:...|.::.:||||..:.:.::..::..:.:.|          .
Human   274 VESTCIVWFTFELVLRFVVCPSKTDFFRNIMNIIDIISIIPYFATLITELVQETEPSAQQNMSLA 338

  Fly   375 LLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQDNP 439
            :|....:||:.|:|||:|||.||:||..|.|||.:||.||:|||.:|::.|:|..|:||  .|.|
Human   339 ILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE--VDEP 401

  Fly   440 DNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFY-- 502
            ::.|.|||.|.|||:||||||||||:.|.|..|..||.|||:|||||||||||||||||:.||  
Human   402 ESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHR 466

  Fly   503 -SHTQARSKLPKKRRRVLPVEQPRRKREPTAPHRGRTNAIKQT 544
             :..:.:..:|.:..|:|         .......|.|:::.:|
Human   467 ETENEEKQNIPGEIERIL---------NSVGSRMGSTDSLNKT 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 33/92 (36%)
BTB_2 7..97 CDD:280393 33/90 (37%)
Ion_trans 307..506 CDD:278921 97/211 (46%)
Ion_trans_2 <449..499 CDD:285168 38/49 (78%)
KCNA10NP_005540.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..50
BTB_2 88..179 CDD:308049 33/98 (34%)
Ion_trans 255..467 CDD:306908 99/234 (42%)
Selectivity filter. /evidence=ECO:0000250 421..426 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..511 3/12 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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