DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and KCNA5

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_002225.2 Gene:KCNA5 / 3741 HGNCID:6224 Length:613 Species:Homo sapiens


Alignment Length:566 Identity:185/566 - (32%)
Similarity:256/566 - (45%) Gaps:152/566 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVLNEYFFDRHPGVFTQILNYYRT-GKL 69
            |:.:|:||:|:||...||.:.|.|.|....:.|..:||:.|||||||:...|..||.||:: |:|
Human   121 RVHINISGLRFETQLGTLAQFPNTLLGDPAKRLRYFDPLRNEYFFDRNRPSFDGILYYYQSGGRL 185

  Fly    70 HYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKPTEEQIARLF 134
            ..|.:|...:|.:|:.|:.|....:|.        .|:.:..:.       |.|||...      
Human   186 RRPVNVSLDVFADEIRFYQLGDEAMER--------FREDEGFIK-------EEEKPLPR------ 229

  Fly   135 GFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKTHPGFRVDLP 199
                       |.:||   ::|.:|:.|.||..|:.:|.:||..|.:|:|:|||:|.|.||.:..
Human   230 -----------NEFQR---QVWLIFEYPESSGSARAIAIVSVLVILISIITFCLETLPEFRDERE 280

  Fly   200 SGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSYSSGNFTASGQA 264
            ...|         ||..|.|....|..:  ....:.|||   |||                   .
Human   281 LLRH---------PPAPHQPPAPAPGAN--GSGVMAPPS---GPT-------------------V 312

  Fly   265 TPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFFYVELVCNVWFF 329
            .|:          |.|                            |...|   ||.||..|.:||.
Human   313 APL----------LPR----------------------------TLADP---FFIVETTCVIWFT 336

  Fly   330 IEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVMQRMGEY----------------TGLLEA 378
            .|:::|....|:...|.::.:||||..|...::..:...:.|.                ..:|..
Human   337 FELLVRFFACPSKAGFSRNIMNIIDVVAIFPYFITLGTELAEQQPGGGGGGQNGQQAMSLAILRV 401

  Fly   379 FSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQDNPDNQF 443
            ..:||:.|:|||:|||.||:||..|.:||.:||.||:|||.:|::.|:|..|:||  .||....|
Human   402 IRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAE--ADNQGTHF 464

  Fly   444 KSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFYSHTQAR 508
            .|||...|||:||||||||||:.|.|..|..||:|||:|||||||||||||||||:.|| |.:..
Human   465 SSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY-HRETD 528

  Fly   509 SKLPKKRRRVLPVEQPRRKREPTAPHRGRTNAIKQTPPTGPGLVAG 554
            .:.|    .||..||                   .|...||||..|
Human   529 HEEP----AVLKEEQ-------------------GTQSQGPGLDRG 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 35/92 (38%)
BTB_2 7..97 CDD:280393 35/90 (39%)
Ion_trans 307..506 CDD:278921 96/214 (45%)
Ion_trans_2 <449..499 CDD:285168 37/49 (76%)
KCNA5NP_002225.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..108
2 X 11 AA tandem repeat of D-[SP]-G-V-R-P-L-P-P-L-P 61..82
BTB_2 122..213 CDD:308049 35/98 (36%)
Ion_trans 249..526 CDD:306908 125/353 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..304 6/32 (19%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 418..431 6/12 (50%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 480..485 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..559 11/43 (26%)
PDZ-binding. /evidence=ECO:0000250 611..613
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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