DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and Kcng1

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_001100015.1 Gene:Kcng1 / 296395 RGDID:631416 Length:514 Species:Rattus norvegicus


Alignment Length:554 Identity:150/554 - (27%)
Similarity:235/554 - (42%) Gaps:171/554 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DGENRIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVL----------NEYFFDRHPGV 56
            |...:||:||.||:|.....||.:.|.|||.:| :|..|:|.:|          ||:||||:||.
  Rat    60 DRRRQIIINVGGIKYSLPWTTLDEFPLTRLGQL-KACTNFDDILSVCDDYDVTCNEFFFDRNPGA 123

  Fly    57 FTQILNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTY---------SIHRDTQNTL 112
            |..||.:.|.|||....::|...|:|||.:||:..:.::.||...|         .:.|:.:.  
  Rat   124 FGTILTFLRAGKLRLLREMCALSFQEELLYWGIAEDHLDGCCKRRYLQKIEEFAEMMEREDEE-- 186

  Fly   113 AILDKLDIENEKPTEEQIARLFGFEEALSNGELN-CWQRIKPKIWAMFDEPSSSTGAKIVAGMSV 176
            ..||..|.|:|.|             :.|.|.|: |.:|::.    |.::|.|....|:.|.:||
  Rat   187 EALDSEDQESEGP-------------STSEGRLSRCMRRLRD----MVEKPHSGLPGKVFACLSV 234

  Fly   177 FFIFVSVISFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSI 241
            .|:.|:.::..:.|.|..|.:                                            
  Rat   235 LFVTVTAVNLSVSTLPSLREE-------------------------------------------- 255

  Fly   242 GPTFRVTNYTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGW 306
                             ...||.:.:.                             ||       
  Rat   256 -----------------EEQGQCSQMC-----------------------------HN------- 267

  Fly   307 IETYGQPHEAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVM----- 366
                      .|.||.||..||.:|.::|.|.:|:.:.|::||:.:||..|.|.:|..::     
  Rat   268 ----------VFIVESVCVGWFSLEFLLRFIQAPSKFAFLRSPLTLIDLVAILPYYVTLLVDGAA 322

  Fly   367 -QRMGEYTG---------LLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLG 421
             .|....||         :|.....:||:.:.:|.|||.||:.|..|.:...:|..||:.||.:.
  Rat   323 SSRRKPSTGNSYLDKVGLVLRVLRALRILYVMRLARHSLGLQTLGLTARRCTREFGLLLLFLCVA 387

  Fly   422 IVFFASLAYYAE-KLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVL 485
            |..||.|.|..| ::.|:|  :|.|||...|||::|||||||||:.|::.||..|.....|:|:|
  Rat   388 IALFAPLLYVIENEMADSP--EFTSIPACYWWAVITMTTVGYGDMVPRSTPGQVVALSSILSGIL 450

  Fly   486 TIALPVPVIVSNFSMFYSHTQARSKLPKKRRRVL 519
            .:|.||.      |:|::.:::..:|.:::.|||
  Rat   451 LMAFPVT------SIFHTFSRSYLELKQEQERVL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 41/101 (41%)
BTB_2 7..97 CDD:280393 40/99 (40%)
Ion_trans 307..506 CDD:278921 74/214 (35%)
Ion_trans_2 <449..499 CDD:285168 22/49 (45%)
Kcng1NP_001100015.1 BTB 65..169 CDD:197585 42/104 (40%)
BTB_2 65..164 CDD:280393 40/99 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..205 8/38 (21%)
Ion_trans 256..471 CDD:278921 78/268 (29%)
Ion_trans_2 383..465 CDD:285168 38/89 (43%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 424..429 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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