DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawl and KCNV1

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_055194.1 Gene:KCNV1 / 27012 HGNCID:18861 Length:500 Species:Homo sapiens


Alignment Length:539 Identity:138/539 - (25%)
Similarity:218/539 - (40%) Gaps:165/539 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LNVSGIRYETYKATLKKIPATRLSRLTEALANY-------------------DPVLNEYFFDRHP 54
            :||.|.|:...:..|...|.|||.:|...:|:|                   :||.|||||||..
Human    43 VNVGGSRFVLSQQALSCFPHTRLGKLAVVVASYRRPGALAAVPSPLELCDDANPVDNEYFFDRSS 107

  Fly    55 GVFTQILNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLD 119
            ..|..:|:|||||:||....:|...|.:|:::||:|...::.||...|...::...||..  |.|
Human   108 QAFRYVLHYYRTGRLHVMEQLCALSFLQEIQYWGIDELSIDSCCRDRYFRRKELSETLDF--KKD 170

  Fly   120 IENEKPTEEQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVI 184
            .|:::...|.       |:..|.|.  | ..::.|:|.:.::|.|||.|:|...:|:.|:.||:|
Human   171 TEDQESQHES-------EQDFSQGP--C-PTVRQKLWNILEKPGSSTAARIFGVISIIFVVVSII 225

  Fly   185 SFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTN 249
            :..|.:                                                           
Human   226 NMALMS----------------------------------------------------------- 231

  Fly   250 YTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPH 314
                                                                .:..|::.     
Human   232 ----------------------------------------------------AELSWLDL----- 239

  Fly   315 EAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFY-------------TDVM 366
            :....:|.||..||..|.::|.:...:..:|::...||||..|.|.||             |..:
Human   240 QLLEILEYVCISWFTGEFVLRFLCVRDRCRFLRKVPNIIDLLAILPFYITLLVESLSGSQTTQEL 304

  Fly   367 QRMGEYTGLLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYY 431
            :.:|.   :::...::|.:|:.||.|||.|||.|..|.....:|:.||:.||.:||..|:::.|:
Human   305 ENVGR---IVQVLRLLRALRMLKLGRHSTGLRSLGMTITQCYEEVGLLLLFLSVGISIFSTVEYF 366

  Fly   432 AEKLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVS 496
            ||  |..||..|.|:|...|||..:||||||||:.|.|..|..|..:|.|:|:|.:|||:.:|..
Human   367 AE--QSIPDTTFTSVPCAWWWATTSMTTVGYGDIRPDTTTGKIVAFMCILSGILVLALPIAIIND 429

  Fly   497 NFSMFYSHTQARSKLPKKR 515
            .||..|...:.:....::|
Human   430 RFSACYFTLKLKEAAVRQR 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 37/108 (34%)
BTB_2 7..97 CDD:280393 36/106 (34%)
Ion_trans 307..506 CDD:278921 73/211 (35%)
Ion_trans_2 <449..499 CDD:285168 23/49 (47%)
KCNV1NP_055194.1 BTB_POZ 41..160 CDD:365784 39/116 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..189 7/29 (24%)
Ion_trans 209..435 CDD:366146 81/346 (23%)
Selectivity filter. /evidence=ECO:0000250 392..397 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.