DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawl and KCNG2

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:XP_016881193.1 Gene:KCNG2 / 26251 HGNCID:6249 Length:509 Species:Homo sapiens


Alignment Length:578 Identity:148/578 - (25%)
Similarity:220/578 - (38%) Gaps:177/578 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IILNVSGIRYETYKATLKKIPATRLSR---------LTEALANYDPVLNEYFFDRHPGVFTQILN 62
            :|:||.|.|.....|.|.:.|..||.|         |.....:||...:|:||||.|..|..|:.
Human    62 VIINVGGCRVRLAWAALARCPLARLERLRACRGHDDLLRVCDDYDVSRDEFFFDRSPCAFRAIVA 126

  Fly    63 YYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEK--- 124
            ..|.|||......|...|.:||.:||:|..::|.||                |.:|....|:   
Human   127 LLRAGKLRLLRGPCALAFRDELAYWGIDEARLERCC----------------LRRLRRREEEAAE 175

  Fly   125 ----PTEE----QIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFV 181
                |||.    ..||..|     ..|.|   ||.:.::..:.|.|.|....|:.|.:||.|:.|
Human   176 ARAGPTERGAQGSPARALG-----PRGRL---QRGRRRLRDVVDNPHSGLAGKLFACVSVSFVAV 232

  Fly   182 SVISFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFR 246
            :.:..||.|.|..|.:                                      ...|...|..|
Human   233 TAVGLCLSTMPDIRAE--------------------------------------EERGECSPKCR 259

  Fly   247 VTNYTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYG 311
                                                                             
Human   260 ----------------------------------------------------------------- 259

  Fly   312 QPHEAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFY-------------T 363
                :.|.:|.||..||..|.::|.:.:.:...|:::|:||||..|.|.||             |
Human   260 ----SLFVLETVCVAWFSFEFLLRSLQAESKCAFLRAPLNIIDILALLPFYVSLLLGLAAGPGGT 320

  Fly   364 DVMQRMGEYTGLLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASL 428
            .:::|.|....||.|..::.:||   |.|||.|||.|..|.:..|:|..||:.||.:.:..||.|
Human   321 KLLERAGLVLRLLRALRVLYVMR---LARHSLGLRSLGLTMRRCAREFGLLLLFLCVAMALFAPL 382

  Fly   429 AYYAEKLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPV 493
            .:.||: :......|.|:|...|||:::||||||||:.|::.||..|.....|:|:|.:|.||. 
Human   383 VHLAER-ELGARRDFSSVPASYWWAVISMTTVGYGDMVPRSLPGQVVALSSILSGILLMAFPVT- 445

  Fly   494 IVSNFSMFYSHTQARSKLPKKRRRVLPVEQPRRKREPTAPHRGRTNAIKQTPPTGPGL 551
                 |:|::.:::.|:|.::::|....| |..:.:.|  |...........|...||
Human   446 -----SIFHTFSRSYSELKEQQQRAASPE-PALQEDST--HSATATEDSSQGPDSAGL 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 35/100 (35%)
BTB_2 7..97 CDD:280393 34/98 (35%)
Ion_trans 307..506 CDD:278921 72/211 (34%)
Ion_trans_2 <449..499 CDD:285168 21/49 (43%)
KCNG2XP_016881193.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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