DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawl and Kcng1

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_001074603.1 Gene:Kcng1 / 241794 MGIID:3616086 Length:514 Species:Mus musculus


Alignment Length:554 Identity:150/554 - (27%)
Similarity:234/554 - (42%) Gaps:171/554 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DGENRIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVL----------NEYFFDRHPGV 56
            |...:||:||.||:|.....||.:.|.|||.:| :|..|:|.:|          ||:||||:||.
Mouse    60 DRRRQIIINVGGIKYSLPWTTLDEFPLTRLGQL-KACTNFDDILSVCDDYDVTCNEFFFDRNPGA 123

  Fly    57 FTQILNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTY---------SIHRDTQNTL 112
            |..||.:.|.|||....::|...|:|||.:||:..:.::.||...|         .:.|:.:.  
Mouse   124 FGTILTFLRAGKLRLLREMCALSFQEELLYWGIAEDHLDGCCKRRYLQKIEEFAEMMEREEEE-- 186

  Fly   113 AILDKLDIENEKPTEEQIARLFGFEEALSNGELN-CWQRIKPKIWAMFDEPSSSTGAKIVAGMSV 176
            ..||..|.|:|.|             :.|.|.|: |.:|::.    |.:.|.|....|:.|.:||
Mouse   187 EPLDSEDQESEGP-------------SASEGRLSRCMRRLRD----MVERPHSGLPGKVFACLSV 234

  Fly   177 FFIFVSVISFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSI 241
            .|:.|:.::..:.|.|..|.:                                            
Mouse   235 LFVTVTAVNLSVSTLPSLREE-------------------------------------------- 255

  Fly   242 GPTFRVTNYTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGW 306
                             ...||.:.:.                             ||       
Mouse   256 -----------------EEQGQCSQMC-----------------------------HN------- 267

  Fly   307 IETYGQPHEAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVM----- 366
                      .|.||.||..||.:|.::|.|.:|:.:.|::||:.:||..|.|.:|..::     
Mouse   268 ----------VFIVESVCVGWFSLEFLLRFIQAPSKFAFLRSPLTLIDLVAILPYYVTLLVDGAA 322

  Fly   367 -QRMGEYTG---------LLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLG 421
             .|....||         :|.....:||:.:.:|.|||.||:.|..|.:...:|..||:.||.:.
Mouse   323 SSRRKPSTGNSYLDKVGLVLRVLRALRILYVMRLARHSLGLQTLGLTARRCTREFGLLLLFLCVA 387

  Fly   422 IVFFASLAYYAE-KLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVL 485
            |..||.|.|..| ::.|:|  :|.|||...|||::|||||||||:.|::.||..|.....|:|:|
Mouse   388 IALFAPLLYVIENEMADSP--EFTSIPACYWWAVITMTTVGYGDMVPRSTPGQVVALSSILSGIL 450

  Fly   486 TIALPVPVIVSNFSMFYSHTQARSKLPKKRRRVL 519
            .:|.||.      |:|::.:::..:|.:::.|||
Mouse   451 LMAFPVT------SIFHTFSRSYLELKQEQERVL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 41/101 (41%)
BTB_2 7..97 CDD:280393 40/99 (40%)
Ion_trans 307..506 CDD:278921 74/214 (35%)
Ion_trans_2 <449..499 CDD:285168 22/49 (45%)
Kcng1NP_001074603.1 BTB_POZ_KCNG1_2 60..173 CDD:349728 44/113 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..205 8/39 (21%)
Ion_trans 227..471 CDD:395416 87/358 (24%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 424..429 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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