DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawl and twk-7

DIOPT Version :10

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_498903.3 Gene:twk-7 / 192073 WormBaseID:WBGene00006662 Length:557 Species:Caenorhabditis elegans


Alignment Length:549 Identity:106/549 - (19%)
Similarity:191/549 - (34%) Gaps:156/549 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GIRYETYKATLKKIPATRLSRLTEALANYDPVLNEYFFDRHPGVFTQILNYYRTGKLHYPTDVC- 76
            |:.|::|:...:.....|::.:.|.            |.|.           :...|.|..||. 
 Worm    49 GVEYDSYEELERHEMDDRVTEIPEG------------FHRR-----------QRRNLIYGDDVAT 90

  Fly    77 ---------GPLFEEELEFWGL-------DSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKP 125
                     ..||.||:...||       ||:.:..|   ..|.|.|          :|.|::..
 Worm    91 DEELRVLRREALFGEEVTRAGLGRAEYYEDSHLIHSC---DKSGHED----------IDDESDDE 142

  Fly   126 TEEQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKT 190
            ::::                              ||....||.:..|.:.:..:.: |:..|..|
 Worm   143 SKDE------------------------------DEEEEETGIRKFAKLVLPHVAL-VLLTCTYT 176

  Fly   191 HPG----FRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYT 251
            ..|    :.|:.|                 |:.|.:..|....:    |..:..:....|:    
 Worm   177 VIGALIFYSVEQP-----------------HEQMMKEQQLKLIY----TRQNEFVDDLIRL---- 216

  Fly   252 SYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEA 316
              ::||.|...:...:|       :|...|::..:...| |:..|..|..:|:...||:......
 Worm   217 --AAGNETKRYEWESLA-------ERHMHNMSDQLFVAF-EKYFLTSNEVKKNAATETWTFSSSI 271

  Fly   317 FFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVMQRMGEYTGLLEAFSI 381
            ||.|.:|..:.:...|.:..|  ..:|..:.|   ::....||....|:.:.:.|:  |:..:..
 Worm   272 FFAVTVVTTIGYGNPVPVTNI--GRIWCILFS---LLGIPLTLVTIADLGKFLSEH--LVWLYGN 329

  Fly   382 VRIMRLFKLTRHSPGLRILI----------HTFKASAKELTLLVFFLVLG--IVFFASLAYYAEK 434
            ...::...|:||....|..:          |......|.:..   ||||.  ||:.|.......|
 Worm   330 YLKLKYLILSRHRKERREHVCEHCHSHGMGHDMNIEEKRIPA---FLVLAILIVYTAFGGVLMSK 391

  Fly   435 LQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVI----V 495
            |:  |.:.|.|    .:|:.:||||||:||:.|:....|::..|..:.|:....:.:.::    :
 Worm   392 LE--PWSFFTS----FYWSFITMTTVGFGDLMPRRDGYMYIILLYIILGLAITTMCIDLVGVQYI 450

  Fly   496 SNFSMFYSHTQ-ARSKLPKKRRRVLPVEQ 523
            .....|....| |||.|.....:|:.|.:
 Worm   451 RKIHYFGRKIQDARSALAVVGGKVVLVSE 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB_Shaw-like 4..115 CDD:349723 23/118 (19%)
Ion_trans 307..506 CDD:459842 47/214 (22%)
twk-7NP_498903.3 Ion_trans_2 <265..321 CDD:462301 11/60 (18%)
Ion_trans_2 373..>422 CDD:462301 21/54 (39%)

Return to query results.
Submit another query.