DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and kqt-2

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_509392.3 Gene:kqt-2 / 181078 WormBaseID:WBGene00002234 Length:695 Species:Caenorhabditis elegans


Alignment Length:467 Identity:97/467 - (20%)
Similarity:160/467 - (34%) Gaps:150/467 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 GGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWI------------------ETYGQPHEAFF 318
            |.||||..|.|...:.| |: ||.|.......|.:|                  .|..:.|   |
 Worm    67 GNQRQRNLRRIRLKVYN-FL-EKPLNAASAPYHFFIFGLVIANIILGAATNDNDSTVSKIH---F 126

  Fly   319 YVELVCNVWFFIEVIIRLIVSPNLWQ---------------FIKSPVNIIDFTATLSFYTDVMQR 368
            ::|:...|:|.:|..:|      ||.               ::...|.:||.....:....::.:
 Worm   127 FLEIFMIVFFILEFAVR------LWSVRADAKYRTKYGRLYYLFHTVTLIDILIIPATILLLVFK 185

  Fly   369 MGEYTG-LLEAFSIVRIMRLFKLTRHSPGLR-----ILIHTFKASAKELTLLVFFLVLGIVFFAS 427
            ..:..| .|:....::|:|||.:.|.....:     |::..::..|.....||..|.|..:.:::
 Worm   186 GHDVDGSTLDTLRFIQILRLFHVDRQMATWKLLRKMIILGKWQLMATYYITLVVGLSLATIVYST 250

  Fly   428 LAYYAEKLQDN------PDN---QFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGAL----- 478
            .| .|:.:|||      |:.   .|.::....|:..||:.||||||:.|       ||||     
 Worm   251 EA-LAQGIQDNGYGLIVPEGTNATFPTMAHSWWFTAVTVMTVGYGDIYP-------VGALTKFLV 307

  Fly   479 CALAGV-----------LTIALPV---------------PVIVSNFSMFYSHTQARSKLPKKR-- 515
            |.|..:           :::.|.:               .:..|....::.:..|.:..|.:|  
 Worm   308 CVLGFIAFCTFQAANTQISVGLTLMMEEENKNQQTNRLRNLAASTIQCWWRYHLATNWKPPRRYT 372

  Fly   516 ------------------RRVLPVEQPRRKREPTAPHRGRTNAIKQTPPTGPGLVAGGVVPVGAG 562
                              .||| .::.|.|.|...|       ||:...|....|...::..|..
 Worm   373 YFVHVCYKLYVTEERINQNRVL-AKKLREKLEKKRP-------IKKKSLTHQNSVTAEILKFGFK 429

  Fly   563 GPGLGGHAVGHSAAGAPMF--KDAFGGA--KIGTVNVNGVN--------VIGLHPAQRTTTTMAM 615
            |            ...||.  :|:|..|  ||........:        :..:.||.|.....|.
 Worm   430 G------------MAKPMLEKQDSFDKAERKISLRRTRSEDRRSSLPDTLAVVDPAIRKRVLFAE 482

  Fly   616 AMNEADPTPMSA 627
            |.|.:..|.||:
 Worm   483 ARNSSVETSMSS 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585
BTB_2 7..97 CDD:280393
Ion_trans 307..506 CDD:278921 52/277 (19%)
Ion_trans_2 <449..499 CDD:285168 18/80 (23%)
kqt-2NP_509392.3 Ion_trans 96..318 CDD:366146 51/238 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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