DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and shw-1

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_001022089.1 Gene:shw-1 / 174331 WormBaseID:WBGene00008819 Length:619 Species:Caenorhabditis elegans


Alignment Length:568 Identity:290/568 - (51%)
Similarity:372/568 - (65%) Gaps:95/568 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDGENRIILNVSGIRYETYKATLKKIPATRLSRLTEALANYDPVLNEYFFDRHPGVFTQILNYYR 65
            ||.|:|:||||.|||:|||...|||||||||||||..||||||||||||||||||||:.||||||
 Worm    97 MDTEHRVILNVGGIRHETYSHVLKKIPATRLSRLTPNLANYDPVLNEYFFDRHPGVFSMILNYYR 161

  Fly    66 TGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKPTEEQI 130
            ||||||||:||||||||||||||||:||||||||.||:.|||||:|||:::.||::.:.||:|:|
 Worm   162 TGKLHYPTNVCGPLFEEELEFWGLDANQVEPCCWMTYTQHRDTQDTLAVIESLDLDGDPPTQEEI 226

  Fly   131 ARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKTHPGFR 195
            |:.||:|:....|.::.|||:||::||:||||.||..|::::.:::.|:.:|::.|||||||.||
 Worm   227 AKKFGWEDDYYTGNMSQWQRLKPRVWALFDEPWSSKYARVISVVNIIFVIISIVCFCLKTHPSFR 291

  Fly   196 VDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTSYSSGNFTA 260
            :                                        |...|..|.          |||:|
 Worm   292 I----------------------------------------PDIDISTTM----------GNFSA 306

  Fly   261 SGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFFYVELVCN 325
            .                    :||..:|.....|              |..:.|.:||||||:.|
 Worm   307 P--------------------LNGVQMNNIYVGK--------------TATRAHPSFFYVELLSN 337

  Fly   326 VWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTD-VMQR--MGEYTGLLEAFSIVRIMRL 387
            :||..|.:.|::..||:..|:::|||:|||.||:|||.| .:.|  .|.....:|.|||:||:||
 Worm   338 IWFSGEFLTRMVFCPNVATFLRTPVNLIDFIATVSFYIDWALDRTLSGSNRDSVEFFSIIRILRL 402

  Fly   388 FKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQDNPDNQFKSIPLGLWW 452
            ||||:||.||:|||.||||||:||.|||||::||||.||:|.||||:::.|.:|||.|||:||||
 Worm   403 FKLTQHSTGLKILIQTFKASAQELFLLVFFVLLGIVIFAALVYYAERVEHNEENQFSSIPVGLWW 467

  Fly   453 AIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFYSHTQARSKLPKKRRR 517
            |::|:.|:|:||:.|:|..|..||::|||.||||||||||||||||:|||||.||||||||||||
 Worm   468 AVITICTIGFGDLVPQTSLGRLVGSVCALMGVLTIALPVPVIVSNFAMFYSHAQARSKLPKKRRR 532

  Fly   518 VLPVEQPRRKREPTAPHRGR-TNAIKQTPPTGPGLVAGGVVPVGAGGP 564
            ||   ||...:    |..|| |.|:..:..|..|.|:||......|||
 Worm   533 VL---QPHEIK----PVVGRSTTAVMISALTQRGPVSGGGSNPSDGGP 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 79/91 (87%)
BTB_2 7..97 CDD:280393 77/89 (87%)
Ion_trans 307..506 CDD:278921 119/201 (59%)
Ion_trans_2 <449..499 CDD:285168 33/49 (67%)
shw-1NP_001022089.1 BTB_Shaw-like 100..211 CDD:349723 93/110 (85%)
Ion_trans 264..521 CDD:366146 142/340 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160124
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 619 1.000 Inparanoid score I483
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D331021at33208
OrthoFinder 1 1.000 - - FOG0000990
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.000

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