DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and Kcng3

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_596917.2 Gene:Kcng3 / 171011 RGDID:628832 Length:433 Species:Rattus norvegicus


Alignment Length:527 Identity:154/527 - (29%)
Similarity:223/527 - (42%) Gaps:133/527 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GENRIILNVSGIRYETYKATLKKIPATRLSRL---------TEALANYDPVLNEYFFDRHPGVFT 58
            |...::|||.|.||...:..||..|..|:|||         .|...:||...||||||||...|.
  Rat     7 GAASVVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNEYFFDRHSEAFG 71

  Fly    59 QILNYYR-TGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIEN 122
            .||.|.| .|||.:...:|...|..|:.:|||:...:|.||...........:|....::|..|.
  Rat    72 FILLYVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCCQRRLDDRMSDTHTFHAAEELGREQ 136

  Fly   123 EKPTEEQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFC 187
            .:||        |.|.|.|...|...:|       .|:||:||..|:|:|.:||.|:.||::..|
  Rat   137 PRPT--------GPEAAPSRRWLERMRR-------TFEEPTSSLAAQILASVSVVFVIVSMVVLC 186

  Fly   188 LKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTS 252
            ..|.|.:|    :.|.|...                                       :.:.:.
  Rat   187 ASTLPDWR----AAAADNRS---------------------------------------LDDRSR 208

  Fly   253 YSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAF 317
            ||         |:|                                 ||...|            
  Rat   209 YS---------ASP---------------------------------GREPSG------------ 219

  Fly   318 FYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVMQRM--GEYTGLLEA-- 378
             .:|.:|..||..|.|:|.|||.|..:|:|.|:||||..|...:|..|:..:  ||.:.|..|  
  Rat   220 -IIEAICIGWFTAECIVRFIVSKNKCEFVKRPLNIIDLLAITPYYISVLMTVFTGENSQLQRAGV 283

  Fly   379 -FSIVRIMRLF---KLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQD-- 437
             ..::|:||:|   ||.||..||:.|..|.|...:|:.:|:.|:.:.:..|::|:...|...|  
  Rat   284 TLRVLRMMRIFWVIKLARHFIGLQTLGLTLKRCYREMVMLLVFICVAMAIFSALSQLLEHGLDLE 348

  Fly   438 NPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNFSMFY 502
            ..:..|.|||...||.|::||||||||:.|.|.||..:|.:|.::|::.:|||:..|..:|...|
  Rat   349 TSNKDFASIPAACWWVIISMTTVGYGDMYPITVPGRILGGVCVVSGIVLLALPITFIYHSFVQCY 413

  Fly   503 SHTQARS 509
            ...:.||
  Rat   414 HELKFRS 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 40/101 (40%)
BTB_2 7..97 CDD:280393 39/99 (39%)
Ion_trans 307..506 CDD:278921 73/208 (35%)
Ion_trans_2 <449..499 CDD:285168 22/49 (45%)
Kcng3NP_596917.2 BTB 11..119 CDD:197585 41/107 (38%)
BTB 11..111 CDD:295341 39/99 (39%)
Ion_trans 216..417 CDD:278921 74/213 (35%)
Ion_trans_2 <360..405 CDD:285168 21/44 (48%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 370..375 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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