DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawl and KCNG3

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_579875.1 Gene:KCNG3 / 170850 HGNCID:18306 Length:436 Species:Homo sapiens


Alignment Length:535 Identity:153/535 - (28%)
Similarity:223/535 - (41%) Gaps:146/535 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GENRIILNVSGIRYETYKATLKKIPATRLSRL---------TEALANYDPVLNEYFFDRHPGVFT 58
            |...::|||.|.||...:..||..|..|:|||         .|...:||...||||||||...|.
Human     7 GAASVVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNEYFFDRHSEAFG 71

  Fly    59 QILNYYR-TGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCW--------STYSIHRDTQNTLAI 114
            .||.|.| .|||.:...:|...|..|:.:|||:...:|.||.        .||:.:...:..:..
Human    72 FILLYVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCCQRRLDDRMSDTYTFYSADEPGVLG 136

  Fly   115 LDKLDIENEKPTEEQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFI 179
            .|:             ||..|.|.|.|...|...:|       .|:||:||..|:|:|.:||.|:
Human   137 RDE-------------ARPGGAEAAPSRRWLERMRR-------TFEEPTSSLAAQILASVSVVFV 181

  Fly   180 FVSVISFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPT 244
            .||::..|..|.|.:|    :.|.|...                                     
Human   182 IVSMVVLCASTLPDWR----NAAADNRS------------------------------------- 205

  Fly   245 FRVTNYTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIET 309
              :.:.:.||:|                                          .||...|    
Human   206 --LDDRSRYSAG------------------------------------------PGREPSG---- 222

  Fly   310 YGQPHEAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVMQRM--GEY 372
                     .:|.:|..||..|.|:|.|||.|..:|:|.|:||||..|...:|..|:..:  ||.
Human   223 ---------IIEAICIGWFTAECIVRFIVSKNKCEFVKRPLNIIDLLAITPYYISVLMTVFTGEN 278

  Fly   373 TGLLEA---FSIVRIMRLF---KLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYY 431
            :.|..|   ..::|:||:|   ||.||..||:.|..|.|...:|:.:|:.|:.:.:..|::|:..
Human   279 SQLQRAGVTLRVLRMMRIFWVIKLARHFIGLQTLGLTLKRCYREMVMLLVFICVAMAIFSALSQL 343

  Fly   432 AEKLQD--NPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVI 494
            .|...|  ..:..|.|||...||.|::||||||||:.|.|.||..:|.:|.::|::.:|||:..|
Human   344 LEHGLDLETSNKDFTSIPAACWWVIISMTTVGYGDMYPITVPGRILGGVCVVSGIVLLALPITFI 408

  Fly   495 VSNFSMFYSHTQARS 509
            ..:|...|...:.||
Human   409 YHSFVQCYHELKFRS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 40/101 (40%)
BTB_2 7..97 CDD:280393 39/99 (39%)
Ion_trans 307..506 CDD:278921 73/208 (35%)
Ion_trans_2 <449..499 CDD:285168 22/49 (45%)
KCNG3NP_579875.1 BTB_POZ_KCNG3 11..122 CDD:349729 41/110 (37%)
Ion_trans 219..420 CDD:395416 74/213 (35%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 373..378 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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