DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shawl and Kcns2

DIOPT Version :9

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:NP_001258633.1 Gene:Kcns2 / 16539 MGIID:1197011 Length:477 Species:Mus musculus


Alignment Length:529 Identity:152/529 - (28%)
Similarity:231/529 - (43%) Gaps:155/529 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DGENRIILNVSGIRYETYKATLKKIPATRLSRL---------TEALANYDPVLNEYFFDRHPGVF 57
            |||.||  ||.|.:......||.:.|.|||.||         .|...:||.|..|::|||:|.:|
Mouse    16 DGEIRI--NVGGFKRRLRSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELF 78

  Fly    58 TQILNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIEN 122
            ..:|::|.|||||...::|...|.:|:|:||::...::.||  :||.|.         .|::.|.
Mouse    79 PYVLHFYHTGKLHVMAELCVFSFSQEIEYWGINEFFIDSCC--SYSYHG---------RKVEPEQ 132

  Fly   123 EKPTE--EQIARLFGFEEALS--------NGE-LNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSV 176
            ||..|  :|.:....|:|.|:        :|: |..::|   ::|...|.|..|..:::.:.:|:
Mouse   133 EKWDEQSDQESTTSSFDEILAFYNDASKFDGQPLGNFRR---QLWLALDNPGYSVLSRVFSVLSI 194

  Fly   177 FFIFVSVISFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSI 241
            ..:..|:|:.||.:.|.|::           |.:.|.| |.||..|                   
Mouse   195 LVVLGSIITMCLNSLPDFQI-----------PDSQGNP-GEDPRFE------------------- 228

  Fly   242 GPTFRVTNYTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGW 306
                                                                 |:.|.|      
Mouse   229 -----------------------------------------------------IVEHFG------ 234

  Fly   307 IETYGQPHEAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFY-TDVMQRMG 370
                              ..||..|::.|..|:|:..:|.|:.:|:||..:.:.|| |.|:..:.
Mouse   235 ------------------IAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVPFYITLVVNLVV 281

  Fly   371 EYTGLL-------EAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASL 428
            |.:..|       :...::||.|:.||.|||.|||.|..|.|.|.||:.||:.:|.:||..|:.:
Mouse   282 ESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVGLLLLYLSVGISIFSVV 346

  Fly   429 AYYAEKLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPV 493
            ||..|| ::|  ....:||...|||.|:|||||||||.|.|..|....:.|.|||:|.:.||:.:
Mouse   347 AYTIEK-EEN--EGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLTASACILAGILVVVLPITL 408

  Fly   494 IVSNFSMFY 502
            |.:.||.||
Mouse   409 IFNKFSHFY 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB 7..99 CDD:197585 36/100 (36%)
BTB_2 7..97 CDD:280393 35/98 (36%)
Ion_trans 307..506 CDD:278921 75/204 (37%)
Ion_trans_2 <449..499 CDD:285168 24/49 (49%)
Kcns2NP_001258633.1 BTB_2 19..118 CDD:308049 36/100 (36%)
Ion_trans 186..421 CDD:306908 92/343 (27%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 374..379 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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