DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shawl and Kcnk4

DIOPT Version :10

Sequence 1:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster
Sequence 2:XP_006526780.1 Gene:Kcnk4 / 16528 MGIID:1298234 Length:427 Species:Mus musculus


Alignment Length:230 Identity:50/230 - (21%)
Similarity:73/230 - (31%) Gaps:78/230 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 MGEYTGLLEAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYA- 432
            :|:..|......|..|..:|......||   |:.:..|        |.||::|.:.|.....:. 
Mouse   168 VGDRLGSSLRRGIGHIEAIFLKWHVPPG---LVRSLSA--------VLFLLIGCLLFVLTPTFVF 221

  Fly   433 ------EKLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGM------------FVGALC 479
                  .||:            .:::.|||:||||:||..|....|.            .:..|.
Mouse   222 SYMESWSKLE------------AIYFVIVTLTTVGFGDYVPGDGTGQNSPAYQPLVWFWILFGLA 274

  Fly   480 ALAGVLTIALPVPVIVSNFSMFYSH----------TQARS----KLPKKRRRVLPVEQPRRKREP 530
            ..|.|||       .:.|:....|.          .||.|    ...:..:|..|...|..|.:|
Mouse   275 YFASVLT-------TIGNWLRAVSRRTRAEMGGLTAQAASWTGTVTARVTQRTGPSAPPPEKEQP 332

  Fly   531 TAPHRGRTNAIKQTPPTGPGLVAGGVVPVGAGGPG 565
            ..|         .:.|..|.:|.      .||.||
Mouse   333 LLP---------SSLPAPPAVVE------PAGRPG 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShawlNP_001097131.2 BTB_Shaw-like 4..115 CDD:349723
Ion_trans 307..506 CDD:459842 34/165 (21%)
Kcnk4XP_006526780.1 Ion_trans_2 <135..172 CDD:462301 1/3 (33%)
Ion_trans_2 210..288 CDD:462301 20/96 (21%)
PLN02983 <322..>374 CDD:215533 12/46 (26%)
Blue background indicates that the domain is not in the aligned region.

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